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internship/swash/processing/sws_npz.py

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import argparse
import configparser
import logging
import pathlib
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import numpy as np
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import pandas as pd
from .read_swash import ReadSwash
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parser = argparse.ArgumentParser(description="Convert swash output to numpy")
parser.add_argument("-v", "--verbose", action="count", default=0)
args = parser.parse_args()
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
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log = logging.getLogger("sws_npz")
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log.info("Starting sws -> npz converter")
config = configparser.ConfigParser()
config.read("config.ini")
sws_out = pathlib.Path(config.get("swash", "out"))
inp = pathlib.Path(config.get("post", "inp"))
log.info(f"Reading swash output from '{sws_out}'")
rsws = ReadSwash()
rsws.read_time(sws_out.joinpath("tsec.dat"))
rsws.read_x(sws_out.joinpath("xp.dat"))
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log.info("Reading 'dep'")
rsws.read_scalar(sws_out.joinpath("dep.dat"))
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log.info("Reading 'botl'")
rsws.read_scalar(sws_out.joinpath("botl.dat"))
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log.info("Reading 'watl'")
rsws.read_scalar(sws_out.joinpath("watl.dat"))
# log.info("Reading 'press'")
# rsws.read_scalar(sws_out.joinpath("press.dat"))
# log.info("Reading 'disch'")
# rsws.read_vector(sws_out.joinpath("disch.dat"))
# log.info("Reading 'ustar'")
# rsws.read_scalar(sws_out.joinpath("ustar.dat"))
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log.info("Reading 'vel'")
rsws.read_vector(sws_out.joinpath("vel.dat"))
# log.info("Reading 'vz'")
# rsws.read_scalar_lay(sws_out.joinpath("vz.dat"))
# log.info("Reading 'velk'")
# rsws.read_vector_lay(sws_out.joinpath("velk.dat"))
# log.info("Reading 'zk'")
# rsws.read_scalar_lay(sws_out.joinpath("zk.dat"))
# log.info("Reading 'brkp'")
# rsws.read_scalar(sws_out.joinpath("brkp.dat"))
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log.info(f"Writing npz file in '{inp}'")
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inp.mkdir(exist_ok=True)
np.savez_compressed(inp.joinpath("sws"), t=rsws.t, x=rsws.x, *rsws.data)