Update README, orbitals
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README.md
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README.md
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@ -27,101 +27,9 @@ Le projet est séparé en dossiers pour chaque partie. Les dossiers sont les sui
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`swash`
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: Modèle 1D NLSW Swash
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## Configuration
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## Fonctionnement
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Each part can be run in their respective directories.
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```
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$ python -m processing.swash -h
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usage: swash.py [-h] [-v] [-c CONFIG]
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Dans chaque dossier se trouve un fichier `README.md` détaillant son fonctionnement.
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Run swash model
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options:
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-h, --help show this help message and exit
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-v, --verbose
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-c CONFIG, --config CONFIG
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```
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## Bathymetry
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Configuration:
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```
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[inp]
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root: input directory
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base: bathymetry database (.xyz) -- not provided in this repository
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hires: 1d hires smoothed breakwater profile (.dat)
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hstru: 1d hires smoothed breakwater porosity height (.dat)
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poro: 1d breakwater porosity (.dat)
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psize: 1d porosity size (.dat)
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hires_step: mesh sizing of 1d profile
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[out]
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margin: margin around the buoy and breakwater for subdomain
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no_breakwater: option to remove breakwater
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root: output directory
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sub: output file for subdomain
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out: output file for 1d projection
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step: mesh size
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left: margin for 1d projection (breakwater side)
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right: margin for 1d projection (buoy side)
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[artha]
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lat: latitude of the breakwater
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lon: longitude of the breakwater
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[buoy]
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lat: latitude of the buoy
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lon: longitude of the buoy
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```
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* Insert database in `data/data`
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* Run `processing.subdomain` to generate 2D data in a smaller domain
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* Run `processing.projection` to generate a 1D bathymetry
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## Swash
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Configuration:
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```
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[data]
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out: input directory (output of bathymetry)
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[swash]
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input: swash input file (.sws)
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path: path to swash directory (should contain swashrun and swash.exe)
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out: output directory for swash (created at the end of the computation)
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mpi: number of mpi threads (omit to use serial)
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[post]
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inp: input directory for post-processing (output of sws_npz)
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compare: input directory for post-processing comparison (omit to display results from single case)
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out: output directory for figures
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x0: position of reflection calculations
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t0: minimum time for reflection calculations (necessary because of boundary condition ramping)
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```
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* Run `processing.swash` to run the Swash model
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* Run `processing.sws_npz` to convert Swash output to Numpy files
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* Run `processing.post` to plot wave height at a point, water level at an
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instant, reflection coefficient at a point
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* Run `processing.animate` to plot an animation of water level
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* Run `processing.layers` to plot an animation of layers with flow velocity
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## OlaFlow
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Configuration:
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```
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[swash]
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np_out: input of olaflow from swash (output of sws_npz)
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[bathy]
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bathy: bathymetry to be used by olaflow
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hstru: height of porous domain (see bathy)
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scale: openscad scaling (mesh sizing in [x,y,z])
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out: output folder for stl bathymetry
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[olaflow]
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root: olaflow computation directory
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```
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* Run `processing.bathy` to generate stl input files
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* Run `run_ola.sh` to run OlaFlow model
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Les scripts Python sont regroupés dans un dossier `processing`, et généralement exécutables en fonctionnement module :
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`python -m processing.script`.
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40
data/README.md
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40
data/README.md
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@ -0,0 +1,40 @@
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# Data
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Ce dossier regroupe les données d'entrée et les scripts de pré-traitement des données.
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## Configuration initiale
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Afin de limiter l'espace utilisé, le fichier de bathymétrie n'est pas fourni. Il est recommandé d'utiliser la base de
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donnée construite par V. Roeber.
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Les scripts de ce dossier sont configurés à l'aide d'un fichier `config.ini`. Les options seront détaillées pour chaque
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script par la suite.
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## Scripts
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### Lambert
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`lambert.py` contient une classe permettant de réaliser la projection en coordonnées cartésiennes de la bathymétrie en
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coordonnées sphériques.
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### Nandasena
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`nandasena.py` permet de calculer le critère de déplacement de bloc de Nandasena (2011). Configuration dans le code
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directement en modifiant le contenu de la variable `const`.
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### Orbitals
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`orbitals.py` permet de tracer la trajectoire de la bouée lors du passage de la vague scélérate identifiée en 2 et 3
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dimensions.
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### Configuration
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`python -m processing.orbitals [-c CONFIG] [-v]`
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* `-c CONFIG` : choix d'un fichier de configuration (`.ini`)
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* `-v` : verbose
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```
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[inp]
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root : racine des fichiers d'entrée
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raw_ts : liste des chemins vers les fichiers de données brutes de la bouée
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[out]
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root : racine des fichiers de sortie
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```
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@ -22,8 +22,6 @@ config.read(args.config)
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inp_root = pathlib.Path(config.get("inp", "root"))
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out_root = pathlib.Path(config.get("out", "root"))
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out_ts = out_root.joinpath("ts.dat")
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raw_ts = []
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for tsi in config.get("inp", "raw_ts").split(","):
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raw_ts.append(
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@ -98,7 +96,7 @@ ax2dv.grid(c="k", alpha=.2)
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ax2dv.set(aspect="equal", xlabel="x (m)", ylabel="z (m)")
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ax2dv.set(ylim=(-10, 10))
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ax2dv.yaxis.set_minor_locator(MultipleLocator(1))
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fig2dv.savefig("out_orbitals.pdf")
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fig2dv.savefig("out_orbitals.jpg")
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fig2dv.savefig(out_root.joinpath("orbitals.pdf"))
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fig2dv.savefig(out_root.joinpath("out_orbitals.jpg"))
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plt.show()
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