m2cce/internship
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Revert to separate npy outputs

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This commit is contained in:
Edgar P. Burkhart 2022-03-15 10:43:29 +01:00
parent b6bf7596be
commit a71146a6bd
Signed by: edpibu
GPG key ID: 9833D3C5A25BD227
2 changed files with 20 additions and 29 deletions
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28
swash/processing/read_swash.py
View file

@ -10,11 +10,10 @@ class ReadSwash:
self._n_t = None
self._t = None
self._x = None
self._data = {}
@classmethod
def read_nohead(cls, path):
with tempfile.NamedTemporaryFile(dir=path.parent) as tmpfile:
with tempfile.TemporaryFile() as tmpfile:
with open(path) as file:
subprocess.run(("tr", "-d", "\n"), stdin=file, stdout=tmpfile)
tmpfile.seek(0)
@ -32,28 +31,17 @@ class ReadSwash:
def read_scalar(self, path, const=False):
if const:
self._data[path.stem] = self.read_nohead(path).reshape(
(self._n_t, self._n_x)
)[0, :]
return
self._data[path.stem] = self.read_nohead(path).reshape(
(self._n_t, self._n_x)
)
return self.read_nohead(path).reshape((self._n_t, self._n_x))[0, :]
return self.read_nohead(path).reshape((self._n_t, self._n_x))
def read_vector(self, path):
self._data[path.stem] = self.read_nohead(path).reshape(
(self._n_t, 2, self._n_x)
)
return self.read_nohead(path).reshape((self._n_t, 2, self._n_x))
def read_scalar_lay(self, path):
self._data[path.stem] = self.read_nohead(path).reshape(
(self._n_t, -1, self._n_x)
)
return self.read_nohead(path).reshape((self._n_t, -1, self._n_x))
def read_vector_lay(self, path):
self._data[path.stem] = self.read_nohead(path).reshape(
(self._n_t, 2, -1, self._n_x)
)
return self.read_nohead(path).reshape((self._n_t, 2, -1, self._n_x))
@property
def t(self):
@ -62,7 +50,3 @@ class ReadSwash:
@property
def x(self):
return self._x
@property
def data(self):
return self._data

21
swash/processing/sws_npz.py
View file

@ -27,20 +27,27 @@ rsws = ReadSwash()
rsws.read_time(sws_out.joinpath("tsec.dat"))
rsws.read_x(sws_out.joinpath("xp.dat"))
inp.mkdir(exist_ok=True)
log.info(f"Wrinting output in '{inp}'")
log.info("Reading 'dep'")
rsws.read_scalar(sws_out.joinpath("dep.dat"))
np.save(inp.joinpath("dep"), rsws.read_scalar(sws_out.joinpath("dep.dat")))
log.info("Reading 'botl'")
rsws.read_scalar(sws_out.joinpath("botl.dat"), const=True)
np.save(
inp.joinpath("botl"),
rsws.read_scalar(sws_out.joinpath("botl.dat"), const=True),
)
log.info("Reading 'watl'")
rsws.read_scalar(sws_out.joinpath("watl.dat"))
np.save(inp.joinpath("watl"), rsws.read_scalar(sws_out.joinpath("watl.dat")))
log.info("Reading 'vel'")
rsws.read_vector(sws_out.joinpath("vel.dat"))
np.save(inp.joinpath("vel"), rsws.read_vector(sws_out.joinpath("vel.dat")))
log.info("Reading 'press'")
rsws.read_scalar(sws_out.joinpath("press.dat"))
np.save(inp.joinpath("press"), rsws.read_scalar(sws_out.joinpath("press.dat")))
log.info("Reading 'zk'")
rsws.read_scalar_lay(sws_out.joinpath("zk.dat"))
np.save(inp.joinpath("zk"), rsws.read_scalar_lay(sws_out.joinpath("zk.dat")))
log.info("Reading 'velk'")
rsws.read_vector_lay(sws_out.joinpath("velk.dat"))
np.save(
inp.joinpath("velk"), rsws.read_vector_lay(sws_out.joinpath("velk.dat"))
)
log.info(f"Writing npz file in '{inp}'")
inp.mkdir(exist_ok=True)