LFS wtf
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.gitignore
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.gitignore
vendored
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@ -1,3 +1,430 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:6f1f708298df65b3ffcd304c283fcb17994fe9bffe139cdd5069ab6b490cce4a
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size 5056
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# ---> Python
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# Byte-compiled / optimized / DLL files
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__pycache__/
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*.py[cod]
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*$py.class
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# C extensions
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*.so
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# Distribution / packaging
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.Python
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build/
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develop-eggs/
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dist/
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downloads/
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eggs/
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.eggs/
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lib/
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lib64/
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parts/
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sdist/
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var/
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wheels/
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share/python-wheels/
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*.egg-info/
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.installed.cfg
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*.egg
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MANIFEST
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# PyInstaller
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# Usually these files are written by a python script from a template
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# before PyInstaller builds the exe, so as to inject date/other infos into it.
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*.manifest
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||||
*.spec
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||||
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# Installer logs
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||||
pip-log.txt
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pip-delete-this-directory.txt
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# Unit test / coverage reports
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||||
htmlcov/
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.tox/
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.nox/
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.coverage
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.coverage.*
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.cache
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nosetests.xml
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coverage.xml
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*.cover
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*.py,cover
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.hypothesis/
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.pytest_cache/
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cover/
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||||
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# Translations
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*.mo
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||||
*.pot
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||||
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||||
# Django stuff:
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*.log
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||||
local_settings.py
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||||
db.sqlite3
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db.sqlite3-journal
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||||
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||||
# Flask stuff:
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||||
instance/
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||||
.webassets-cache
|
||||
|
||||
# Scrapy stuff:
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||||
.scrapy
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||||
|
||||
# Sphinx documentation
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||||
docs/_build/
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||||
|
||||
# PyBuilder
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||||
.pybuilder/
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||||
target/
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||||
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||||
# Jupyter Notebook
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.ipynb_checkpoints
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||||
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# IPython
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profile_default/
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ipython_config.py
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# pyenv
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||||
# For a library or package, you might want to ignore these files since the code is
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||||
# intended to run in multiple environments; otherwise, check them in:
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||||
# .python-version
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||||
|
||||
# pipenv
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||||
# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
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||||
# However, in case of collaboration, if having platform-specific dependencies or dependencies
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||||
# having no cross-platform support, pipenv may install dependencies that don't work, or not
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||||
# install all needed dependencies.
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||||
#Pipfile.lock
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||||
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||||
# PEP 582; used by e.g. github.com/David-OConnor/pyflow
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__pypackages__/
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||||
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||||
# Celery stuff
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||||
celerybeat-schedule
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||||
celerybeat.pid
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||||
|
||||
# SageMath parsed files
|
||||
*.sage.py
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||||
|
||||
# Environments
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||||
.env
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||||
.venv
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||||
env/
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venv/
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ENV/
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||||
env.bak/
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||||
venv.bak/
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||||
|
||||
# Spyder project settings
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||||
.spyderproject
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||||
.spyproject
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||||
|
||||
# Rope project settings
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||||
.ropeproject
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||||
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||||
# mkdocs documentation
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/site
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||||
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# mypy
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.mypy_cache/
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.dmypy.json
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dmypy.json
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||||
|
||||
# Pyre type checker
|
||||
.pyre/
|
||||
|
||||
# pytype static type analyzer
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||||
.pytype/
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||||
|
||||
# Cython debug symbols
|
||||
cython_debug/
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||||
|
||||
# ---> TeX
|
||||
## Core latex/pdflatex auxiliary files:
|
||||
*.aux
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||||
*.lof
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||||
*.log
|
||||
*.lot
|
||||
*.fls
|
||||
*.out
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||||
*.toc
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||||
*.fmt
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||||
*.fot
|
||||
*.cb
|
||||
*.cb2
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||||
.*.lb
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||||
|
||||
## Intermediate documents:
|
||||
*.dvi
|
||||
*.xdv
|
||||
*-converted-to.*
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||||
# these rules might exclude image files for figures etc.
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# *.ps
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# *.eps
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# *.pdf
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||||
|
||||
## Generated if empty string is given at "Please type another file name for output:"
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||||
.pdf
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||||
|
||||
## Bibliography auxiliary files (bibtex/biblatex/biber):
|
||||
*.bbl
|
||||
*.bcf
|
||||
*.blg
|
||||
*-blx.aux
|
||||
*-blx.bib
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||||
*.run.xml
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||||
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||||
## Build tool auxiliary files:
|
||||
*.fdb_latexmk
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||||
*.synctex
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||||
*.synctex(busy)
|
||||
*.synctex.gz
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||||
*.synctex.gz(busy)
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||||
*.pdfsync
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||||
|
||||
## Build tool directories for auxiliary files
|
||||
# latexrun
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latex.out/
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||||
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||||
## Auxiliary and intermediate files from other packages:
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# algorithms
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||||
*.alg
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||||
*.loa
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||||
|
||||
# achemso
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acs-*.bib
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||||
|
||||
# amsthm
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||||
*.thm
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||||
|
||||
# beamer
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||||
*.nav
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||||
*.pre
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||||
*.snm
|
||||
*.vrb
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||||
|
||||
# changes
|
||||
*.soc
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||||
|
||||
# comment
|
||||
*.cut
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||||
|
||||
# cprotect
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||||
*.cpt
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||||
|
||||
# elsarticle (documentclass of Elsevier journals)
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||||
*.spl
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||||
|
||||
# endnotes
|
||||
*.ent
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||||
|
||||
# fixme
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||||
*.lox
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||||
|
||||
# feynmf/feynmp
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||||
*.mf
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||||
*.mp
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||||
*.t[1-9]
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||||
*.t[1-9][0-9]
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||||
*.tfm
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||||
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||||
#(r)(e)ledmac/(r)(e)ledpar
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*.end
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||||
*.?end
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*.[1-9]
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||||
*.[1-9][0-9]
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||||
*.[1-9][0-9][0-9]
|
||||
*.[1-9]R
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||||
*.[1-9][0-9]R
|
||||
*.[1-9][0-9][0-9]R
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||||
*.eledsec[1-9]
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||||
*.eledsec[1-9]R
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||||
*.eledsec[1-9][0-9]
|
||||
*.eledsec[1-9][0-9]R
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||||
*.eledsec[1-9][0-9][0-9]
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||||
*.eledsec[1-9][0-9][0-9]R
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||||
|
||||
# glossaries
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||||
*.acn
|
||||
*.acr
|
||||
*.glg
|
||||
*.glo
|
||||
*.gls
|
||||
*.glsdefs
|
||||
*.lzo
|
||||
*.lzs
|
||||
|
||||
# uncomment this for glossaries-extra (will ignore makeindex's style files!)
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||||
# *.ist
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||||
|
||||
# gnuplottex
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||||
*-gnuplottex-*
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||||
|
||||
# gregoriotex
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||||
*.gaux
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||||
*.glog
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||||
*.gtex
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||||
|
||||
# htlatex
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||||
*.4ct
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||||
*.4tc
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||||
*.idv
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||||
*.lg
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||||
*.trc
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||||
*.xref
|
||||
|
||||
# hyperref
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||||
*.brf
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||||
|
||||
# knitr
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*-concordance.tex
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# TODO Uncomment the next line if you use knitr and want to ignore its generated tikz files
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||||
# *.tikz
|
||||
*-tikzDictionary
|
||||
|
||||
# listings
|
||||
*.lol
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||||
|
||||
# luatexja-ruby
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||||
*.ltjruby
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||||
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||||
# makeidx
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*.idx
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||||
*.ilg
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*.ind
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||||
|
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# minitoc
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*.maf
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*.mlf
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*.mlt
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||||
*.mtc[0-9]*
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*.slf[0-9]*
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||||
*.slt[0-9]*
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||||
*.stc[0-9]*
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||||
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||||
# minted
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||||
_minted*
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*.pyg
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||||
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# morewrites
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*.mw
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||||
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||||
# newpax
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*.newpax
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||||
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||||
# nomencl
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||||
*.nlg
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*.nlo
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*.nls
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||||
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# pax
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*.pax
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||||
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# pdfpcnotes
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*.pdfpc
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||||
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# sagetex
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*.sagetex.sage
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*.sagetex.py
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*.sagetex.scmd
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# scrwfile
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*.wrt
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# sympy
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*.sout
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*.sympy
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sympy-plots-for-*.tex/
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# pdfcomment
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||||
*.upa
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||||
*.upb
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||||
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# pythontex
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||||
*.pytxcode
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pythontex-files-*/
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# tcolorbox
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*.listing
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# thmtools
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*.loe
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# TikZ & PGF
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*.dpth
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*.md5
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*.auxlock
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||||
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# todonotes
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||||
*.tdo
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# vhistory
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*.hst
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*.ver
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# easy-todo
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*.lod
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# xcolor
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*.xcp
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# xmpincl
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*.xmpi
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# xindy
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*.xdy
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# xypic precompiled matrices and outlines
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*.xyc
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*.xyd
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# endfloat
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*.ttt
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*.fff
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||||
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# Latexian
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TSWLatexianTemp*
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## Editors:
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# WinEdt
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*.bak
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*.sav
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||||
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||||
# Texpad
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.texpadtmp
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# LyX
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*.lyx~
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# Kile
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*.backup
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# gummi
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.*.swp
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# KBibTeX
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*~[0-9]*
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# TeXnicCenter
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*.tps
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# auto folder when using emacs and auctex
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./auto/*
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*.el
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# expex forward references with \gathertags
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*-tags.tex
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# standalone packages
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*.sta
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# Makeindex log files
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*.lpz
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# xwatermark package
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*.xwm
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# REVTeX puts footnotes in the bibliography by default, unless the nofootinbib
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# option is specified. Footnotes are the stored in a file with suffix Notes.bib.
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# Uncomment the next line to have this generated file ignored.
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#*Notes.bib
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10
README.md
10
README.md
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@ -1,3 +1,7 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:a7c1ed11b3cadc1a6dc0034d60898e8d0962e45b4aa2c50f9769b43d3f2b4099
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size 231
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# M2 Internship
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"Simulation of the breaking wave flow which generated the 50T concrete block
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displacement at the Artha breakwater on February 28, 2017"
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[Report](https://kalliope.edgarpierre.fr/latex/m2cce/internship/report.pdf)
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4
data/.gitignore
vendored
4
data/.gitignore
vendored
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@ -1,3 +1 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:17bc194f27793ae12ccd604a1f667d03cc6f9b07222f4e67d633b7296cc97e24
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size 5
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/out
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@ -1,3 +1,26 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:13605228ca2c48f7bc869db92b329f5395122662ced9a7ce930241b821a11f7a
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size 300
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[inp]
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root=data
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base=Database_20220224.xyz
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hires=bathyhires.dat
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hstru=Hstru.dat
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poro=Poro.dat
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psize=Psize.dat
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hires_step=0.5
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[out]
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no_breakwater=True
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root=out
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sub=bathy_sub.npy
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out=bathy.npy
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step=1
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left=0
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right=150
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#plot=True
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[artha]
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lat=43.398450
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lon=-1.673097
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[buoy]
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lat=43.408333
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lon=-1.681667
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@ -1,3 +1 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:752dec83ecb9ee7fb94f4b1d2f46ce0e4ebbf504002714b798e704fd705e64e8
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size 2639
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|
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@ -1,3 +1 @@
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version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:0b1ea84701b4c5daa9e37293b3a8c84aff9357a425969c5d1720f13ab4ec7606
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size 1308
|
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|
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|
|
@ -1,3 +1 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:eaa82206c1a952bdfd10ba322149514d2a3aaf7db7a08d0f89d96fa282bfdc43
|
||||
size 900
|
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|
|
@ -1,3 +1 @@
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|||
version https://git-lfs.github.com/spec/v1
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||||
oid sha256:cd7a7e42abc9ec28c5cfe91964e8cb6d7807a947463cd708edf835386b6f5c2c
|
||||
size 4809
|
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|
||||
File diff suppressed because one or more lines are too long
|
|
@ -1,3 +1,100 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:418acad81c40d8d5dcde803335a86309b51121bab736b553a60c0735ff98cc19
|
||||
size 2601
|
||||
import numpy as np
|
||||
|
||||
|
||||
class Lambert:
|
||||
def __init__(
|
||||
self,
|
||||
X0=1.7e6,
|
||||
Y0=2.2e6,
|
||||
lambda0=3,
|
||||
phi0=43,
|
||||
phi1=42.25,
|
||||
phi2=43.75,
|
||||
a=6378137,
|
||||
e=0.081819190842622,
|
||||
):
|
||||
self._X0 = X0
|
||||
self._Y0 = Y0
|
||||
|
||||
self._lambda0 = np.radians(lambda0)
|
||||
self._phi0 = np.radians(phi0)
|
||||
self._phi1 = np.radians(phi1)
|
||||
self._phi2 = np.radians(phi2)
|
||||
|
||||
self._a = a
|
||||
self._e = e
|
||||
|
||||
self._set_n()
|
||||
self._set_rho0()
|
||||
|
||||
def cartesian(self, lam, phi):
|
||||
lam = np.radians(lam)
|
||||
phi = np.radians(phi)
|
||||
|
||||
theta = self._n * (lam - self._lambda0)
|
||||
rho = self._rho(phi)
|
||||
rho0 = self._rho(self._phi0)
|
||||
|
||||
X = self._X0 + rho * np.sin(theta)
|
||||
Y = self._Y0 + rho0 - rho * np.cos(theta)
|
||||
|
||||
return X, Y
|
||||
|
||||
def _set_n(self):
|
||||
self._n = (
|
||||
np.log(np.cos(self._phi2) / np.cos(self._phi1))
|
||||
+ (
|
||||
np.log(
|
||||
(1 - (self._e * np.sin(self._phi1) ** 2))
|
||||
/ (1 - (self._e * np.sin(self._phi2) ** 2))
|
||||
)
|
||||
/ 2
|
||||
)
|
||||
) / (
|
||||
np.log(
|
||||
(
|
||||
np.tan(self._phi1 / 2 + np.pi / 4)
|
||||
* (
|
||||
(1 - self._e * np.sin(self._phi2))
|
||||
* (1 + self._e * np.sin(self._phi1))
|
||||
)
|
||||
** (self._e / 2)
|
||||
)
|
||||
/ (
|
||||
np.tan(self._phi2 / 2 + np.pi / 4)
|
||||
* (
|
||||
(1 + self._e * np.sin(self._phi2))
|
||||
* (1 - self._e * np.sin(self._phi1))
|
||||
)
|
||||
** (self._e / 2)
|
||||
)
|
||||
)
|
||||
)
|
||||
|
||||
def _set_rho0(self):
|
||||
self._rho0 = (
|
||||
self._a
|
||||
* np.cos(self._phi1)
|
||||
/ (self._n * np.sqrt(1 - self._e**2 * np.sin(self._phi1) ** 2))
|
||||
* (
|
||||
np.tan(self._phi1 / 2 + np.pi / 4)
|
||||
* (
|
||||
(1 - self._e * np.sin(self._phi1))
|
||||
/ (1 + self._e * np.sin(self._phi1))
|
||||
)
|
||||
** (self._e / 2)
|
||||
)
|
||||
** self._n
|
||||
)
|
||||
|
||||
def _rho(self, phi):
|
||||
return (
|
||||
self._rho0
|
||||
* (
|
||||
1
|
||||
/ np.tan(phi / 2 + np.pi / 4)
|
||||
* ((1 + self._e * np.sin(phi)) / (1 - self._e * np.sin(phi)))
|
||||
** (self._e / 2)
|
||||
)
|
||||
** self._n
|
||||
)
|
||||
|
|
|
|||
|
|
@ -1,3 +1,144 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:45448faf5475a6aac61efe9b3f69e20a7e44bdcb7e493d7e8d7c8d1cb7eac5fd
|
||||
size 4370
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
|
||||
import numpy as np
|
||||
from scipy import interpolate
|
||||
try:
|
||||
import matplotlib.pyplot as plt
|
||||
except ImportError:
|
||||
plt = None
|
||||
|
||||
from .lambert import Lambert
|
||||
|
||||
parser = argparse.ArgumentParser(description="Pre-process bathymetry")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("bathy")
|
||||
|
||||
log.info("Starting bathymetry pre-processing")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
inp_root = pathlib.Path(config.get("inp", "root"))
|
||||
out_root = pathlib.Path(config.get("out", "root"))
|
||||
bathy_inp = out_root.joinpath(config.get("out", "sub"))
|
||||
hires_inp = inp_root.joinpath(config.get("inp", "hires"))
|
||||
hstru_inp = inp_root.joinpath(config.get("inp", "hstru"))
|
||||
poro_inp = inp_root.joinpath(config.get("inp", "poro"))
|
||||
psize_inp = inp_root.joinpath(config.get("inp", "psize"))
|
||||
bathy_out = inp_root.joinpath(config.get("out", "out"))
|
||||
|
||||
log.info(f"Loading bathymetry from {bathy_inp}")
|
||||
bathy_curvi = np.load(bathy_inp)
|
||||
|
||||
projection = Lambert()
|
||||
bathy = np.stack(
|
||||
(
|
||||
*projection.cartesian(bathy_curvi[:, 0], bathy_curvi[:, 1]),
|
||||
bathy_curvi[:, 2],
|
||||
),
|
||||
axis=1,
|
||||
)
|
||||
log.debug(f"Cartesian bathy: {bathy}")
|
||||
|
||||
artha_curvi = np.array(
|
||||
(config.getfloat("artha", "lon"), config.getfloat("artha", "lat"))
|
||||
)
|
||||
buoy_curvi = np.array(
|
||||
(config.getfloat("buoy", "lon"), config.getfloat("buoy", "lat"))
|
||||
)
|
||||
|
||||
artha = np.asarray(projection.cartesian(*artha_curvi))
|
||||
buoy = np.asarray(projection.cartesian(*buoy_curvi))
|
||||
|
||||
D = np.diff(np.stack((artha, buoy)), axis=0)
|
||||
x = np.arange(
|
||||
config.getfloat("out", "left", fallback=0),
|
||||
np.sqrt((D**2).sum()) + config.getfloat("out", "right", fallback=0),
|
||||
config.getfloat("out", "step", fallback=1),
|
||||
)
|
||||
theta = np.angle(D.dot((1, 1j)))
|
||||
|
||||
coords = artha + (x * np.stack((np.cos(theta), np.sin(theta)))).T
|
||||
|
||||
log.info("Interpolating bathymetry in 1D")
|
||||
z = interpolate.griddata(bathy[:, :2], bathy[:, 2], coords)
|
||||
log.debug(f"z: {z}")
|
||||
|
||||
_hires = np.loadtxt(hires_inp)[::-1]
|
||||
bathy_hires = np.stack(
|
||||
(
|
||||
np.linspace(
|
||||
0,
|
||||
(_hires.size - 1) * config.getfloat("inp", "hires_step"),
|
||||
_hires.size,
|
||||
),
|
||||
_hires,
|
||||
),
|
||||
axis=1,
|
||||
)
|
||||
del _hires
|
||||
log.debug(f"Bathy hires: {bathy_hires}")
|
||||
|
||||
z_cr = 5
|
||||
hires_crossing = np.diff(np.signbit(bathy_hires[:, 1] - z_cr)).nonzero()[0][-1]
|
||||
log.debug(f"Hires crossing: {hires_crossing}")
|
||||
z_crossing = np.diff(np.signbit(z - z_cr)).nonzero()[0][-1]
|
||||
log.debug(f"Z crossing: {z_crossing}")
|
||||
|
||||
x_min_hires = x[z_crossing] + (
|
||||
bathy_hires[:, 0].min() - bathy_hires[hires_crossing, 0]
|
||||
)
|
||||
x_max_hires = x[z_crossing] + (
|
||||
bathy_hires[:, 0].max() - bathy_hires[hires_crossing, 0]
|
||||
)
|
||||
log.debug(f"Replacing range: [{x_min_hires},{x_max_hires}]")
|
||||
|
||||
flt_x = (x > x_min_hires) & (x < x_max_hires)
|
||||
hstru = np.zeros(z.shape)
|
||||
poro = np.zeros(z.shape)
|
||||
psize = np.zeros(z.shape)
|
||||
if config.getboolean("out", "no_breakwater", fallback=False):
|
||||
z[flt_x] = z[flt_x][-1]
|
||||
else:
|
||||
z[flt_x] = interpolate.griddata(
|
||||
(bathy_hires[:, 0],),
|
||||
bathy_hires[:, 1],
|
||||
(x[flt_x] - x[z_crossing] + bathy_hires[hires_crossing, 0]),
|
||||
)
|
||||
|
||||
hstru_in = np.loadtxt(hstru_inp)[::-1]
|
||||
hstru[flt_x] = interpolate.griddata(
|
||||
(bathy_hires[:,0],),
|
||||
hstru_in,
|
||||
(x[flt_x] - x[z_crossing] + bathy_hires[hires_crossing, 0]),
|
||||
)
|
||||
|
||||
poro_in = np.loadtxt(poro_inp)[::-1]
|
||||
poro[flt_x] = interpolate.griddata(
|
||||
(bathy_hires[:,0],),
|
||||
poro_in,
|
||||
(x[flt_x] - x[z_crossing] + bathy_hires[hires_crossing, 0]),
|
||||
)
|
||||
|
||||
psize_in = np.loadtxt(psize_inp)[::-1]
|
||||
psize[flt_x] = interpolate.griddata(
|
||||
(bathy_hires[:,0],),
|
||||
psize_in,
|
||||
(x[flt_x] - x[z_crossing] + bathy_hires[hires_crossing, 0]),
|
||||
)
|
||||
|
||||
np.savetxt(out_root.joinpath("bathy.dat"), z[::-1], newline=" ")
|
||||
np.savetxt(out_root.joinpath("hstru.dat"), hstru[::-1], newline=" ")
|
||||
np.savetxt(out_root.joinpath("poro.dat"), poro[::-1], newline=" ")
|
||||
np.savetxt(out_root.joinpath("psize.dat"), psize[::-1], newline=" ")
|
||||
|
||||
if plt is not None and config.getboolean("out", "plot", fallback=False):
|
||||
fig, ax = plt.subplots()
|
||||
ax.plot(-x, z, color="k")
|
||||
ax.fill_between(-x, z+hstru, z, color="k", alpha=.2)
|
||||
plt.show(block=True)
|
||||
|
|
|
|||
|
|
@ -1,3 +1,53 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:cee15595a8dac4e684da41c7b1cb9b80bd091a6879407ad516114d46addd0af0
|
||||
size 1435
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
|
||||
import numpy as np
|
||||
|
||||
parser = argparse.ArgumentParser(description="Pre-process bathymetry")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("bathy")
|
||||
|
||||
log.info("Starting bathymetry pre-processing")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
artha = np.array(
|
||||
(config.getfloat("artha", "lon"), config.getfloat("artha", "lat"))
|
||||
)
|
||||
buoy = np.array(
|
||||
(config.getfloat("buoy", "lon"), config.getfloat("buoy", "lat"))
|
||||
)
|
||||
log.debug(f"artha: {artha}")
|
||||
log.debug(f"buoy: {buoy}")
|
||||
|
||||
domain = np.stack((artha, buoy))
|
||||
domain.sort(axis=0)
|
||||
log.debug(f"domain: {domain}")
|
||||
|
||||
domain[0] -= 0.002
|
||||
domain[1] += 0.002
|
||||
log.debug(f"domain: {domain}")
|
||||
|
||||
inp_root = pathlib.Path(config.get("inp", "root"))
|
||||
out_root = pathlib.Path(config.get("out", "root"))
|
||||
bathy_inp = inp_root.joinpath(config.get("inp", "base"))
|
||||
bathy_out = out_root.joinpath(config.get("out", "sub"))
|
||||
log.info(f"Reading bathymetry from '{bathy_inp}'")
|
||||
raw_bathy = np.loadtxt(bathy_inp)
|
||||
log.debug(f"Initial size: {raw_bathy.shape}")
|
||||
|
||||
bathy = raw_bathy[
|
||||
((raw_bathy[:, :2] > domain[0]) & (raw_bathy[:, :2] < domain[1])).all(
|
||||
axis=1
|
||||
)
|
||||
]
|
||||
del raw_bathy
|
||||
log.debug(f"Final size: {bathy.shape}")
|
||||
|
||||
log.info(f"Saving subdomain to 'bathy'")
|
||||
np.save(bathy_out, bathy)
|
||||
|
|
|
|||
5
olaflow/.gitignore
vendored
5
olaflow/.gitignore
vendored
|
|
@ -1,3 +1,2 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:cf4ca7f0b967de32ac39d5114affc278588a6e19ee759de9787b1b027d85ca93
|
||||
size 12
|
||||
/inp*
|
||||
/out*
|
||||
|
|
|
|||
|
|
@ -1,3 +1,12 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:4cca67e7132cdb83b3539560426db3ff1ef47501b08aab6e70c20058999b709b
|
||||
size 181
|
||||
[swash]
|
||||
np_out=../swash/inp_post
|
||||
|
||||
[bathy]
|
||||
bathy=../swash/data/bathyhires.dat
|
||||
hstru=../swash/data/Hstru.dat
|
||||
scale=[0.5,1,1]
|
||||
translate=[-149,0,0]
|
||||
out=out_bathy
|
||||
|
||||
[olaflow]
|
||||
root=inp_of
|
||||
|
|
|
|||
|
|
@ -1,3 +1,67 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:02a49b6841af79ff0298086c070b14a5cba96ddc2e3d4a6e47ec893a41ffcabc
|
||||
size 1763
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.7.x |
|
||||
| \\ / A nd | Web: www.OpenFOAM.com |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volVectorField;
|
||||
location "0";
|
||||
object U;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 1 -1 0 0 0 0];
|
||||
|
||||
internalField uniform (0 0 0);
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type waveVelocity;
|
||||
waveDictName waveDict;
|
||||
value uniform (0 0 0);
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type pressureInletOutletVelocity;
|
||||
value uniform (0 0 0);
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type fixedValue;
|
||||
value uniform (0 0 0);
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type fixedValue;
|
||||
value uniform (0 0 0);
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type fixedValue;
|
||||
value uniform (0 0 0);
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type fixedValue;
|
||||
value uniform (0 0 0);
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type waveAbsorption2DVelocity;
|
||||
value uniform (0 0 0);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,61 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f5815c4d0fe173050d279c74f01a350fdb5762f6c0c7744b6f59da2d9366750c
|
||||
size 1543
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.5-dev |
|
||||
| \\ / A nd | Web: http://www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
object alpha.water;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 0 0 0 0 0 0];
|
||||
|
||||
internalField uniform 0;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type waveAlpha;
|
||||
waveDictName waveDict;
|
||||
value uniform 0;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0;
|
||||
value uniform 0;
|
||||
}
|
||||
}
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,61 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f5815c4d0fe173050d279c74f01a350fdb5762f6c0c7744b6f59da2d9366750c
|
||||
size 1543
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.5-dev |
|
||||
| \\ / A nd | Web: http://www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
object alpha.water;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 0 0 0 0 0 0];
|
||||
|
||||
internalField uniform 0;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type waveAlpha;
|
||||
waveDictName waveDict;
|
||||
value uniform 0;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0;
|
||||
value uniform 0;
|
||||
}
|
||||
}
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,68 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:cb8b90a6e3bf668cf9f0394601eeea1ec4ad1ded3d5cb5f7e2cedaaa08a4ed6e
|
||||
size 1836
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.1.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
object epsilon;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 2 -3 0 0 0 0];
|
||||
|
||||
internalField uniform 0.0001;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.0001;
|
||||
value uniform 0.0001;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.0001;
|
||||
value uniform 0.0001;
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type epsilonWallFunction;
|
||||
value uniform 0.0001;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type epsilonWallFunction;
|
||||
value uniform 0.0001;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type epsilonWallFunction;
|
||||
value uniform 0.0001;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type epsilonWallFunction;
|
||||
value uniform 0.0001;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.0001;
|
||||
value uniform 0.0001;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,69 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:3a05abdcb6113cffadd6a238f6a7a8dca034cbd0d2ea4c06f714fdf0cddf0d24
|
||||
size 1879
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.7.1 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.com |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
location "0";
|
||||
object k;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 2 -2 0 0 0 0];
|
||||
|
||||
internalField uniform 0.00000001;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.00000001;
|
||||
value uniform 0.00000001;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.00000001;
|
||||
value uniform 0.00000001;
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type kqRWallFunction;
|
||||
value uniform 0.00000001;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type kqRWallFunction;
|
||||
value uniform 0.00000001;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type kqRWallFunction;
|
||||
value uniform 0.00000001;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type kqRWallFunction;
|
||||
value uniform 0.00000001;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.00000001;
|
||||
value uniform 0.00000001;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,78 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:49fb3dca6cb0039e6a2290ee1cf416ffd8f724e47f43f3c81d86545fa4ef0529
|
||||
size 2034
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 3.0.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
location "0";
|
||||
object nut;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 2 -1 0 0 0 0];
|
||||
|
||||
internalField uniform 0;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type calculated;
|
||||
value uniform 0;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type calculated;
|
||||
value uniform 0;
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type nutkWallFunction;
|
||||
Cmu 0.09;
|
||||
kappa 0.41;
|
||||
E 9.8;
|
||||
value uniform 0;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type calculated;
|
||||
value uniform 0;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type nutkWallFunction;
|
||||
Cmu 0.09;
|
||||
kappa 0.41;
|
||||
E 9.8;
|
||||
value uniform 0;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type nutkWallFunction;
|
||||
Cmu 0.09;
|
||||
kappa 0.41;
|
||||
E 9.8;
|
||||
value uniform 0;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type nutkWallFunction;
|
||||
Cmu 0.09;
|
||||
kappa 0.41;
|
||||
E 9.8;
|
||||
value uniform 0;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,68 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:27f00229cb842a16851724de3ff0c4444e578950745e000b1f7478f03eda6a2d
|
||||
size 1812
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.7.1 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.com |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
object omega;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 0 -1 0 0 0 0];
|
||||
|
||||
internalField uniform 0.001;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.001;
|
||||
value uniform 0.001;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.001;
|
||||
value uniform 0.001;
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type omegaWallFunction;
|
||||
value uniform 0.001;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type omegaWallFunction;
|
||||
value uniform 0.001;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type omegaWallFunction;
|
||||
value uniform 0.001;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type omegaWallFunction;
|
||||
value uniform 0.001;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type inletOutlet;
|
||||
inletValue uniform 0.001;
|
||||
value uniform 0.001;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,71 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:c2896667d7304d2edd00eb1e04b7e627d3213d4a15ed666abcbe0b42573298b9
|
||||
size 1861
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.5-dev |
|
||||
| \\ / A nd | Web: http://www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
object p_rgh;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [1 -1 -2 0 0 0 0];
|
||||
|
||||
internalField uniform 0;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
"wall."
|
||||
{
|
||||
type fixedFluxPressure;
|
||||
value uniform 0;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type fixedFluxPressure;
|
||||
value uniform 0;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type fixedFluxPressure;
|
||||
value uniform 0;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type fixedFluxPressure;
|
||||
value uniform 0;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type fixedFluxPressure;
|
||||
value uniform 0;
|
||||
}
|
||||
inlet
|
||||
{
|
||||
type fixedFluxPressure;
|
||||
value uniform 0;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type totalPressure;
|
||||
U U;
|
||||
phi phi;
|
||||
rho rho;
|
||||
psi none;
|
||||
gamma 1;
|
||||
p0 uniform 0;
|
||||
value uniform 0;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,59 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:03affa8787f68693c98769149a76374690e7f36b80583f2681ec34f24ea47286
|
||||
size 1432
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.1.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
location "0";
|
||||
object porosityIndex;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 0 0 0 0 0 0];
|
||||
|
||||
internalField uniform 0;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,59 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:03affa8787f68693c98769149a76374690e7f36b80583f2681ec34f24ea47286
|
||||
size 1432
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.1.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class volScalarField;
|
||||
location "0";
|
||||
object porosityIndex;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 0 0 0 0 0 0];
|
||||
|
||||
internalField uniform 0;
|
||||
|
||||
boundaryField
|
||||
{
|
||||
inlet
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
"wall."
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bathy
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
defaultFaces
|
||||
{
|
||||
type empty;
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type zeroGradient;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,22 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:8a11f81533737d6e1f1a477323b9f8b4a2ae2de5bcb746517a9f9e9f5cdeb337
|
||||
size 939
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.1.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class uniformDimensionedVectorField;
|
||||
location "constant";
|
||||
object g;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
dimensions [0 1 -2 0 0 0 0];
|
||||
value ( 0 0 -9.81 );
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,29 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:5e1095d33bb97b00d5189edfe97f4269412bb1d200820e5eb8a41116d34b119f
|
||||
size 1149
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.1.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "constant";
|
||||
object porosityDict;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
// Materials: clear region, core, secondary armour layer, primary armour layer
|
||||
// a,b,c: tuning parameters
|
||||
a 2(0 50);
|
||||
b 2(0 1.2);
|
||||
c 2(0 0.34);
|
||||
|
||||
// D50: mean nominal diameter
|
||||
D50 2(1 4);
|
||||
// porosity (phi)
|
||||
porosity 2(1 0.5);
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,37 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f4561c01839ffcda3d0fd7821c09353dcd2702767a6e7a5f2bbbd0f3326f9a32
|
||||
size 1189
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 3.0.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "constant";
|
||||
object transportProperties;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
phases (water air);
|
||||
|
||||
water
|
||||
{
|
||||
transportModel Newtonian;
|
||||
nu [0 2 -1 0 0 0 0] 1e-06;
|
||||
rho [1 -3 0 0 0 0 0] 1000;
|
||||
}
|
||||
|
||||
air
|
||||
{
|
||||
transportModel Newtonian;
|
||||
nu [0 2 -1 0 0 0 0] 1.48e-05;
|
||||
rho [1 -3 0 0 0 0 0] 1;
|
||||
}
|
||||
|
||||
sigma [1 0 -2 0 0 0 0] 0.07;
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,29 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f182a4876e5e432ecc3076764d476ebbc69e71c4ea96a580dbf2aea719cc8504
|
||||
size 983
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.1.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "constant";
|
||||
object turbulenceProperties;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
simulationType RAS;
|
||||
|
||||
RAS
|
||||
{
|
||||
RASModel kEpsilon;
|
||||
|
||||
turbulence on;
|
||||
|
||||
printCoeffs on;
|
||||
}
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,29 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f182a4876e5e432ecc3076764d476ebbc69e71c4ea96a580dbf2aea719cc8504
|
||||
size 983
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.1.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "constant";
|
||||
object turbulenceProperties;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
simulationType RAS;
|
||||
|
||||
RAS
|
||||
{
|
||||
RASModel kEpsilon;
|
||||
|
||||
turbulence on;
|
||||
|
||||
printCoeffs on;
|
||||
}
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,29 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:16bfe34d3f75df510cd7ee6f83704f42f2adf1c67fcb19193c0f5a3c2b782928
|
||||
size 984
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.1.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "constant";
|
||||
object turbulenceProperties;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
simulationType RAS;
|
||||
|
||||
RAS
|
||||
{
|
||||
RASModel kOmegaSST;
|
||||
|
||||
turbulence on;
|
||||
|
||||
printCoeffs on;
|
||||
}
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,37 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f9a10f9231f198dac0137b50d4260486bd98a595827a5a73cab0bde679645892
|
||||
size 1202
|
||||
/*---------------------------------------------------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.3 |
|
||||
| \\ / A nd | Web: http://www.openfoam.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "constant";
|
||||
object waveDict;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
//waveType regular;
|
||||
//waveTheory cnoidal;
|
||||
//genAbs 1;
|
||||
//absDir 0.0;
|
||||
//nPaddles 1;
|
||||
//wavePeriod 20.0;
|
||||
//waveHeight 15.0;
|
||||
//waveDir 0.0;
|
||||
//wavePhase 0.;
|
||||
//tSmooth 0.0;
|
||||
|
||||
waveType solitary;
|
||||
waveTheory Boussinesq;
|
||||
genAbs 0;
|
||||
absDir 0.0;
|
||||
nPaddles 1;
|
||||
waveHeight 7.5;
|
||||
waveDir 0.0;
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,81 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f80bbe1742a2cb4f424a5cf3d9534e8ccf1dd01d9ce30b559de0519b1a56f182
|
||||
size 1550
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.7.1 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.com |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
object blockMeshDict;
|
||||
}
|
||||
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
scale 1;
|
||||
|
||||
vertices
|
||||
(
|
||||
(0 0 -30)
|
||||
(150 0 -30)
|
||||
(150 0 20)
|
||||
(0 0 20)
|
||||
(0 1 -30)
|
||||
(150 1 -30)
|
||||
(150 1 20)
|
||||
(0 1 20)
|
||||
);
|
||||
|
||||
blocks
|
||||
(
|
||||
hex (0 1 5 4 3 2 6 7) (300 1 100) simpleGrading (1 1 1)
|
||||
);
|
||||
|
||||
edges
|
||||
(
|
||||
);
|
||||
|
||||
boundary
|
||||
(
|
||||
inlet
|
||||
{
|
||||
type patch;
|
||||
faces
|
||||
(
|
||||
(0 4 7 3)
|
||||
);
|
||||
}
|
||||
outlet
|
||||
{
|
||||
type patch;
|
||||
faces
|
||||
(
|
||||
(1 5 6 2)
|
||||
);
|
||||
}
|
||||
wall1
|
||||
{
|
||||
type wall;
|
||||
faces
|
||||
(
|
||||
(0 1 5 4)
|
||||
);
|
||||
}
|
||||
atmosphere
|
||||
{
|
||||
type patch;
|
||||
faces
|
||||
(
|
||||
(3 2 6 7)
|
||||
);
|
||||
}
|
||||
);
|
||||
|
||||
mergePatchPairs
|
||||
(
|
||||
);
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,138 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:fde2446149b2142dfe72f615b0398e46609064847d10cb081567faa1dffaa3c0
|
||||
size 3519
|
||||
/*---------------------------------------------------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.3 |
|
||||
| \\ / A nd | Web: http://www.openfoam.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
location "system";
|
||||
class dictionary;
|
||||
object controlDict;
|
||||
}
|
||||
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
application olaFlow;
|
||||
|
||||
startFrom latestTime;
|
||||
|
||||
startTime 0;
|
||||
|
||||
stopAt endTime;
|
||||
|
||||
endTime 60;
|
||||
|
||||
deltaT 0.1;
|
||||
|
||||
writeControl adjustableRunTime;
|
||||
|
||||
writeInterval 0.5;
|
||||
|
||||
purgeWrite 0;
|
||||
|
||||
writeFormat ascii;
|
||||
|
||||
writePrecision 6;
|
||||
|
||||
compression off;
|
||||
|
||||
timeFormat general;
|
||||
|
||||
timePrecision 6;
|
||||
|
||||
runTimeModifiable yes;
|
||||
|
||||
adjustTimeStep yes;
|
||||
|
||||
maxCo 0.45;
|
||||
maxAlphaCo 0.45;
|
||||
|
||||
maxDeltaT 0.5;
|
||||
/*
|
||||
functions
|
||||
{
|
||||
gaugesVOF
|
||||
{
|
||||
type sets;
|
||||
libs ("libsampling.so");
|
||||
writeControl outputTime;
|
||||
writeInterval 1;
|
||||
setFormat raw;
|
||||
surfaceFormat raw;
|
||||
interpolationScheme cell;
|
||||
fields ( alpha.water );
|
||||
sets
|
||||
(
|
||||
GaugeVOF01
|
||||
{
|
||||
type lineCellFace;
|
||||
axis xyz;
|
||||
start ( 0.5 0.001 0 );
|
||||
end ( 0.5 0.001 1.2 );
|
||||
}
|
||||
GaugeVOF02
|
||||
{
|
||||
type lineCellFace;
|
||||
axis xyz;
|
||||
start ( 9.25 0.001 0 );
|
||||
end ( 9.25 0.001 1.2 );
|
||||
}
|
||||
GaugeVOF03
|
||||
{
|
||||
type lineCellFace;
|
||||
axis xyz;
|
||||
start ( 15.75 0.001 0 );
|
||||
end ( 15.75 0.001 1.2 );
|
||||
}
|
||||
GaugeVOF04
|
||||
{
|
||||
type lineCellFace;
|
||||
axis xyz;
|
||||
start ( 17.75 0.001 0 );
|
||||
end ( 17.75 0.001 1.2 );
|
||||
}
|
||||
GaugeVOF05
|
||||
{
|
||||
type lineCellFace;
|
||||
axis xyz;
|
||||
start ( 21.1 0.001 0 );
|
||||
end ( 21.1 0.001 1.2 );
|
||||
}
|
||||
);
|
||||
}
|
||||
gaugesP
|
||||
{
|
||||
type sets;
|
||||
libs ("libsampling.so");
|
||||
writeControl outputTime;
|
||||
writeInterval 1;
|
||||
setFormat raw;
|
||||
surfaceFormat raw;
|
||||
interpolationScheme cellPointFace;
|
||||
fields ( p );
|
||||
sets
|
||||
(
|
||||
GaugesP
|
||||
{
|
||||
type boundaryPoints;
|
||||
axis xyz;
|
||||
patches 1(caisson);
|
||||
points ((18.0 0.01 0.75)
|
||||
(18.00 0.01 0.80)
|
||||
(18.00 0.01 0.85)
|
||||
(18.00 0.01 0.95)
|
||||
(18.01 0.01 0.70)
|
||||
(18.25 0.01 0.70)
|
||||
(18.50 0.01 0.70)
|
||||
(18.75 0.01 0.70));
|
||||
maxDistance 0.01;
|
||||
}
|
||||
);
|
||||
}
|
||||
}
|
||||
*/
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,50 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:ee25e2be0f0a2f9716af18db406d00c528a38741b943ce61e517db655e07f895
|
||||
size 1247
|
||||
/*---------------------------------------------------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.3 |
|
||||
| \\ / A nd | Web: http://www.openfoam.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
location "system";
|
||||
class dictionary;
|
||||
object decomposeParDict;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
numberOfSubdomains 4;
|
||||
|
||||
method simple;
|
||||
|
||||
simpleCoeffs
|
||||
{
|
||||
n ( 2 2 1 );
|
||||
delta 0.001;
|
||||
}
|
||||
|
||||
hierarchicalCoeffs
|
||||
{
|
||||
n ( 1 1 1 );
|
||||
delta 0.001;
|
||||
order xyz;
|
||||
}
|
||||
|
||||
metisCoeffs
|
||||
{
|
||||
processorWeights ( 1 1 1 1 );
|
||||
}
|
||||
|
||||
manualCoeffs
|
||||
{
|
||||
dataFile "";
|
||||
}
|
||||
|
||||
distributed no;
|
||||
|
||||
roots ();
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,79 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:7fa4d5a860648baa40a54c3f4e9f8913e4e45c7d9276a009edcff4e5d24d9552
|
||||
size 2101
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.3.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "system";
|
||||
object fvSchemes;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
ddtSchemes
|
||||
{
|
||||
default Euler;
|
||||
}
|
||||
|
||||
gradSchemes
|
||||
{
|
||||
default Gauss linear;
|
||||
}
|
||||
|
||||
divSchemes
|
||||
{
|
||||
div(rhoPhi,U) Gauss limitedLinearV 1;
|
||||
div(U) Gauss linear;
|
||||
div((rhoPhi|interpolate(porosity)),U) Gauss limitedLinearV 1;
|
||||
div(rhoPhiPor,UPor) Gauss limitedLinearV 1;
|
||||
div(rhoPhi,UPor) Gauss limitedLinearV 1;
|
||||
div(rhoPhiPor,U) Gauss limitedLinearV 1;
|
||||
div(phi,alpha) Gauss vanLeer;
|
||||
div(phirb,alpha) Gauss interfaceCompression;
|
||||
div((muEff*dev(T(grad(U))))) Gauss linear;
|
||||
div(phi,k) Gauss upwind;
|
||||
div(phi,epsilon) Gauss upwind;
|
||||
div((phi|interpolate(porosity)),k) Gauss upwind;
|
||||
div((phi*interpolate(rho)),k) Gauss upwind;
|
||||
div((phi|interpolate(porosity)),epsilon) Gauss upwind;
|
||||
div(phi,omega) Gauss upwind;
|
||||
div((phi|interpolate(porosity)),omega) Gauss upwind;
|
||||
div((phi*interpolate(rho)),omega) Gauss upwind;
|
||||
div((phi*interpolate(rho)),epsilon) Gauss upwind;
|
||||
}
|
||||
|
||||
laplacianSchemes
|
||||
{
|
||||
default Gauss linear corrected;
|
||||
}
|
||||
|
||||
interpolationSchemes
|
||||
{
|
||||
default linear;
|
||||
}
|
||||
|
||||
snGradSchemes
|
||||
{
|
||||
default corrected;
|
||||
}
|
||||
|
||||
fluxRequired
|
||||
{
|
||||
default no;
|
||||
p_rgh;
|
||||
pcorr;
|
||||
alpha.water;
|
||||
}
|
||||
|
||||
wallDist
|
||||
{
|
||||
method meshWave;
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,95 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:43c8a02d083d05bca2e2822ad7c99bb242bd6ccde563e3c6fc95f523c69dae14
|
||||
size 2122
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 2.3.0 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "system";
|
||||
object fvSolution;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
solvers
|
||||
{
|
||||
"alpha.water.*"
|
||||
{
|
||||
nAlphaCorr 1;
|
||||
nAlphaSubCycles 2;
|
||||
alphaOuterCorrectors yes;
|
||||
cAlpha 1;
|
||||
|
||||
MULESCorr no;
|
||||
nLimiterIter 3;
|
||||
|
||||
solver smoothSolver;
|
||||
smoother symGaussSeidel;
|
||||
tolerance 1e-8;
|
||||
relTol 0;
|
||||
}
|
||||
|
||||
"pcorr.*"
|
||||
{
|
||||
solver PCG;
|
||||
preconditioner DIC;
|
||||
tolerance 1e-5;
|
||||
relTol 0;
|
||||
}
|
||||
|
||||
p_rgh
|
||||
{
|
||||
solver PCG;
|
||||
preconditioner DIC;
|
||||
tolerance 1e-07;
|
||||
relTol 0.05;
|
||||
}
|
||||
|
||||
p_rghFinal
|
||||
{
|
||||
$p_rgh;
|
||||
relTol 0;
|
||||
}
|
||||
|
||||
U
|
||||
{
|
||||
solver smoothSolver;
|
||||
smoother symGaussSeidel;
|
||||
tolerance 1e-06;
|
||||
relTol 0;
|
||||
}
|
||||
|
||||
"(k|epsilon|omega|B|nuTilda).*"
|
||||
{
|
||||
solver smoothSolver;
|
||||
smoother symGaussSeidel;
|
||||
tolerance 1e-08;
|
||||
relTol 0;
|
||||
}
|
||||
}
|
||||
|
||||
PIMPLE
|
||||
{
|
||||
momentumPredictor no;
|
||||
nOuterCorrectors 1;
|
||||
nCorrectors 3;
|
||||
nNonOrthogonalCorrectors 0;
|
||||
}
|
||||
|
||||
relaxationFactors
|
||||
{
|
||||
fields
|
||||
{
|
||||
}
|
||||
equations
|
||||
{
|
||||
".*" 1;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,53 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:991d47c8947d27dcebd777d6da8c1812bfdeac103edb36bf9b7410b04dba84dc
|
||||
size 1873
|
||||
/*---------------------------------------------------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.3 |
|
||||
| \\ / A nd | Web: http://www.openfoam.org |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
location "system";
|
||||
object setFieldsDict;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
defaultFieldValues
|
||||
(
|
||||
volScalarFieldValue alpha.water 0
|
||||
volScalarFieldValue porosityIndex 0
|
||||
);
|
||||
|
||||
regions
|
||||
(
|
||||
boxToCell
|
||||
{
|
||||
box (-10 -10 -100) (500 10 5);
|
||||
|
||||
fieldValues
|
||||
(
|
||||
volScalarFieldValue alpha.water 1
|
||||
);
|
||||
}
|
||||
surfaceToCell
|
||||
{
|
||||
file "./constant/triSurface/rubble.stl";
|
||||
outsidePoints ((0 0 0)); // definition of outside
|
||||
includeCut true; // cells cut by surface
|
||||
includeInside true; // cells not on outside of surf
|
||||
includeOutside false; // cells on outside of surf
|
||||
nearDistance -1; // cells with centre near surf
|
||||
// (set to -1 if not used)
|
||||
curvature -100; // cells within nearDistance
|
||||
// and near surf curvature
|
||||
// (set to -100 if not used)
|
||||
|
||||
fieldValues
|
||||
(
|
||||
volScalarFieldValue porosityIndex 1
|
||||
);
|
||||
}
|
||||
);
|
||||
|
|
|
|||
|
|
@ -1,3 +1,359 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:ad5676a91a20dda1cde9062f5f91090bc1cb740390381802f7222b681d81b74b
|
||||
size 10275
|
||||
/*--------------------------------*- C++ -*----------------------------------*\
|
||||
| ========= | |
|
||||
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
|
||||
| \\ / O peration | Version: 1.7.1 |
|
||||
| \\ / A nd | Web: www.OpenFOAM.com |
|
||||
| \\/ M anipulation | |
|
||||
\*---------------------------------------------------------------------------*/
|
||||
FoamFile
|
||||
{
|
||||
version 2.0;
|
||||
format ascii;
|
||||
class dictionary;
|
||||
object snappyHexMeshDict;
|
||||
}
|
||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||
|
||||
// Which of the steps to run
|
||||
castellatedMesh true;
|
||||
snap false;
|
||||
addLayers false;
|
||||
|
||||
|
||||
// Geometry. Definition of all surfaces. All surfaces are of class
|
||||
// searchableSurface.
|
||||
// Surfaces are used
|
||||
// - to specify refinement for any mesh cell intersecting it
|
||||
// - to specify refinement for any mesh cell inside/outside/near
|
||||
// - to 'snap' the mesh boundary to the surface
|
||||
geometry
|
||||
{
|
||||
|
||||
bloc0.stl
|
||||
{
|
||||
type triSurfaceMesh;
|
||||
name bloc0;
|
||||
}
|
||||
bloc1.stl
|
||||
{
|
||||
type triSurfaceMesh;
|
||||
name bloc1;
|
||||
}
|
||||
|
||||
bathy.stl
|
||||
{
|
||||
type triSurfaceMesh;
|
||||
name bathy;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
|
||||
|
||||
// Settings for the castellatedMesh generation.
|
||||
castellatedMeshControls
|
||||
{
|
||||
|
||||
// Refinement parameters
|
||||
// ~~~~~~~~~~~~~~~~~~~~~
|
||||
|
||||
// If local number of cells is >= maxLocalCells on any processor
|
||||
// switches from from refinement followed by balancing
|
||||
// (current method) to (weighted) balancing before refinement.
|
||||
maxLocalCells 10000000;
|
||||
|
||||
// Overall cell limit (approximately). Refinement will stop immediately
|
||||
// upon reaching this number so a refinement level might not complete.
|
||||
// Note that this is the number of cells before removing the part which
|
||||
// is not 'visible' from the keepPoint. The final number of cells might
|
||||
// actually be a lot less.
|
||||
maxGlobalCells 10000000;
|
||||
|
||||
// The surface refinement loop might spend lots of iterations refining just a
|
||||
// few cells. This setting will cause refinement to stop if <= minimumRefine
|
||||
// are selected for refinement. Note: it will at least do one iteration
|
||||
// (unless the number of cells to refine is 0)
|
||||
minRefinementCells 10;
|
||||
|
||||
// Allow a certain level of imbalance during refining
|
||||
// (since balancing is quite expensive)
|
||||
// Expressed as fraction of perfect balance (= overall number of cells /
|
||||
// nProcs). 0=balance always.
|
||||
maxLoadUnbalance 0.10;
|
||||
|
||||
|
||||
// Number of buffer layers between different levels.
|
||||
// 1 means normal 2:1 refinement restriction, larger means slower
|
||||
// refinement.
|
||||
nCellsBetweenLevels 3;
|
||||
|
||||
|
||||
|
||||
// Explicit feature edge refinement
|
||||
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
|
||||
|
||||
// Specifies a level for any cell intersected by its edges.
|
||||
// This is a featureEdgeMesh, read from constant/triSurface for now.
|
||||
features
|
||||
(
|
||||
//{
|
||||
// file "tanque.stl";
|
||||
// level 2;
|
||||
//}
|
||||
);
|
||||
|
||||
|
||||
|
||||
// Surface based refinement
|
||||
// ~~~~~~~~~~~~~~~~~~~~~~~~
|
||||
|
||||
// Specifies two levels for every surface. The first is the minimum level,
|
||||
// every cell intersecting a surface gets refined up to the minimum level.
|
||||
// The second level is the maximum level. Cells that 'see' multiple
|
||||
// intersections where the intersections make an
|
||||
// angle > resolveFeatureAngle get refined up to the maximum level.
|
||||
|
||||
refinementSurfaces
|
||||
{
|
||||
|
||||
//caisson
|
||||
//{
|
||||
// // Surface-wise min and max refinement level
|
||||
// level ( 1 1 );
|
||||
//}
|
||||
bathy
|
||||
{
|
||||
level ( 0 0 );
|
||||
}
|
||||
bloc0
|
||||
{
|
||||
level ( 0 0 );
|
||||
}
|
||||
bloc1
|
||||
{
|
||||
level ( 0 0 );
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
// Resolve sharp angles
|
||||
resolveFeatureAngle 65;
|
||||
|
||||
|
||||
// Region-wise refinement
|
||||
// ~~~~~~~~~~~~~~~~~~~~~~
|
||||
|
||||
// Specifies refinement level for cells in relation to a surface. One of
|
||||
// three modes
|
||||
// - distance. 'levels' specifies per distance to the surface the
|
||||
// wanted refinement level. The distances need to be specified in
|
||||
// descending order.
|
||||
// - inside. 'levels' is only one entry and only the level is used. All
|
||||
// cells inside the surface get refined up to the level. The surface
|
||||
// needs to be closed for this to be possible.
|
||||
// - outside. Same but cells outside.
|
||||
|
||||
refinementRegions
|
||||
{
|
||||
//mode distance;
|
||||
//levels
|
||||
//(
|
||||
// (1.0 4)
|
||||
// (2.0 3)
|
||||
//);
|
||||
}
|
||||
|
||||
|
||||
// Mesh selection
|
||||
// ~~~~~~~~~~~~~~
|
||||
|
||||
// After refinement patches get added for all refinementSurfaces and
|
||||
// all cells intersecting the surfaces get put into these patches. The
|
||||
// section reachable from the locationInMesh is kept.
|
||||
// NOTE: This point should never be on a face, always inside a cell, even
|
||||
// after refinement.
|
||||
locationInMesh (0.25 0.01 0.25);
|
||||
|
||||
// Whether any faceZones (as specified in the refinementSurfaces)
|
||||
// are only on the boundary of corresponding cellZones or also allow
|
||||
// free-standing zone faces. Not used if there are no faceZones.
|
||||
allowFreeStandingZoneFaces true;
|
||||
}
|
||||
|
||||
|
||||
|
||||
// Settings for the snapping.
|
||||
snapControls
|
||||
{
|
||||
//- Number of patch smoothing iterations before finding correspondence
|
||||
// to surface
|
||||
nSmoothPatch 3;
|
||||
|
||||
//- Relative distance for points to be attracted by surface feature point
|
||||
// or edge. True distance is this factor times local
|
||||
// maximum edge length.
|
||||
tolerance 4.0;
|
||||
|
||||
//- Number of mesh displacement relaxation iterations.
|
||||
nSolveIter 30;
|
||||
|
||||
//- Maximum number of snapping relaxation iterations. Should stop
|
||||
// before upon reaching a correct mesh.
|
||||
nRelaxIter 5;
|
||||
}
|
||||
|
||||
|
||||
|
||||
// Settings for the layer addition.
|
||||
addLayersControls
|
||||
{
|
||||
// Are the thickness parameters below relative to the undistorted
|
||||
// size of the refined cell outside layer (true) or absolute sizes (false).
|
||||
relativeSizes true;
|
||||
|
||||
// Per final patch (so not geometry!) the layer information
|
||||
layers
|
||||
{
|
||||
//batimetria_patch0
|
||||
//{
|
||||
// nSurfaceLayers 2; //was 1 //was 4
|
||||
//}
|
||||
}
|
||||
|
||||
// Expansion factor for layer mesh
|
||||
expansionRatio 1.0;
|
||||
|
||||
//- Wanted thickness of final added cell layer. If multiple layers
|
||||
// is the thickness of the layer furthest away from the wall.
|
||||
// See relativeSizes parameter.
|
||||
finalLayerThickness 0.3;
|
||||
|
||||
//- Minimum thickness of cell layer. If for any reason layer
|
||||
// cannot be above minThickness do not add layer.
|
||||
// Relative to undistorted size of cell outside layer.
|
||||
minThickness 0.1;
|
||||
|
||||
//- If points get not extruded do nGrow layers of connected faces that are
|
||||
// also not grown. This helps convergence of the layer addition process
|
||||
// close to features.
|
||||
nGrow 1;
|
||||
|
||||
|
||||
// Advanced settings
|
||||
|
||||
//- When not to extrude surface. 0 is flat surface, 90 is when two faces
|
||||
// make straight angle.
|
||||
featureAngle 30;
|
||||
|
||||
//- Maximum number of snapping relaxation iterations. Should stop
|
||||
// before upon reaching a correct mesh.
|
||||
nRelaxIter 3;
|
||||
|
||||
// Number of smoothing iterations of surface normals
|
||||
nSmoothSurfaceNormals 1;
|
||||
|
||||
// Number of smoothing iterations of interior mesh movement direction
|
||||
nSmoothNormals 3;
|
||||
|
||||
// Smooth layer thickness over surface patches
|
||||
nSmoothThickness 10;
|
||||
|
||||
// Stop layer growth on highly warped cells
|
||||
maxFaceThicknessRatio 0.5;
|
||||
|
||||
// Reduce layer growth where ratio thickness to medial
|
||||
// distance is large
|
||||
maxThicknessToMedialRatio 0.3;
|
||||
|
||||
// Angle used to pick up medial axis points
|
||||
minMedianAxisAngle 130;
|
||||
|
||||
// Create buffer region for new layer terminations
|
||||
nBufferCellsNoExtrude 0;
|
||||
|
||||
// Overall max number of layer addition iterations
|
||||
nLayerIter 50;
|
||||
}
|
||||
|
||||
|
||||
|
||||
// Generic mesh quality settings. At any undoable phase these determine
|
||||
// where to undo.
|
||||
meshQualityControls
|
||||
{
|
||||
//- Maximum non-orthogonality allowed. Set to 180 to disable.
|
||||
maxNonOrtho 65;
|
||||
|
||||
//- Max skewness allowed. Set to <0 to disable.
|
||||
maxBoundarySkewness 20;
|
||||
maxInternalSkewness 4;
|
||||
|
||||
//- Max concaveness allowed. Is angle (in degrees) below which concavity
|
||||
// is allowed. 0 is straight face, <0 would be convex face.
|
||||
// Set to 180 to disable.
|
||||
maxConcave 80;
|
||||
|
||||
//- Minimum projected area v.s. actual area. Set to -1 to disable.
|
||||
minFlatness 0.5;
|
||||
|
||||
//- Minimum pyramid volume. Is absolute volume of cell pyramid.
|
||||
// Set to a sensible fraction of the smallest cell volume expected.
|
||||
// Set to very negative number (e.g. -1E30) to disable.
|
||||
minVol 1e-13;
|
||||
|
||||
//- Minimum quality of the tet formed by the face-centre
|
||||
// and variable base point minimum decomposition triangles and
|
||||
// the cell centre. This has to be a positive number for tracking
|
||||
// to work. Set to very negative number (e.g. -1E30) to
|
||||
// disable.
|
||||
// <0 = inside out tet,
|
||||
// 0 = flat tet
|
||||
// 1 = regular tet
|
||||
minTetQuality 1e-30;
|
||||
|
||||
//- Minimum face area. Set to <0 to disable.
|
||||
minArea -1;
|
||||
|
||||
//- Minimum face twist. Set to <-1 to disable. dot product of face normal
|
||||
//- and face centre triangles normal
|
||||
minTwist 0.02;
|
||||
|
||||
//- minimum normalised cell determinant
|
||||
//- 1 = hex, <= 0 = folded or flattened illegal cell
|
||||
minDeterminant 0.001;
|
||||
|
||||
//- minFaceWeight (0 -> 0.5)
|
||||
minFaceWeight 0.02;
|
||||
|
||||
//- minVolRatio (0 -> 1)
|
||||
minVolRatio 0.01;
|
||||
|
||||
//must be >0 for Fluent compatibility
|
||||
minTriangleTwist -1;
|
||||
|
||||
|
||||
// Advanced
|
||||
|
||||
//- Number of error distribution iterations
|
||||
nSmoothScale 4;
|
||||
//- amount to scale back displacement at error points
|
||||
errorReduction 0.75;
|
||||
}
|
||||
|
||||
|
||||
// Advanced
|
||||
|
||||
// Flags for optional output
|
||||
// 0 : only write final meshes
|
||||
// 1 : write intermediate meshes
|
||||
// 2 : write volScalarField with cellLevel for postprocessing
|
||||
// 4 : write current intersections as .obj files
|
||||
debug 0;
|
||||
|
||||
|
||||
// Merge tolerance. Is fraction of overall bounding box of initial mesh.
|
||||
// Note: the write tolerance needs to be higher than this.
|
||||
mergeTolerance 1E-6;
|
||||
|
||||
|
||||
// ************************************************************************* //
|
||||
|
|
|
|||
|
|
@ -1,3 +1,39 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:3f12d83a60bae2c19ae50e105a1b2176d5d35cb17d9e9d73f10aefdf225a4003
|
||||
size 1024
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
|
||||
import numpy as np
|
||||
|
||||
from .stl import stl_from_1d
|
||||
|
||||
parser = argparse.ArgumentParser(
|
||||
description="Convert swash output to olaFlow input"
|
||||
)
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("sws_ola")
|
||||
|
||||
log.info("Starting sws -> olaFlow converter")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
bathy = np.loadtxt(config.get("bathy", "bathy"))
|
||||
poro = bathy + np.loadtxt(config.get("bathy", "hstru"))
|
||||
|
||||
out = pathlib.Path(config.get("bathy", "out"))
|
||||
out.mkdir(exist_ok=True)
|
||||
stl_from_1d(
|
||||
bathy,
|
||||
out.joinpath("bathy.stl"),
|
||||
config.get("bathy", "scale", fallback=[1, 1, 1]),
|
||||
config.get("bathy", "translate", fallback=[0, 0, 0]),
|
||||
)
|
||||
stl_from_1d(
|
||||
poro,
|
||||
out.joinpath("poro.stl"),
|
||||
config.get("bathy", "scale", fallback=[1, 1, 1]),
|
||||
config.get("bathy", "translate", fallback=[0, 0, 0]),
|
||||
)
|
||||
|
|
|
|||
|
|
@ -1,3 +1,38 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:2ec88dc3c20627b5f6d383e748ac7876415cacd4aff2cce3cb39bfdeb713b858
|
||||
size 857
|
||||
import re
|
||||
|
||||
from fluidfoam import readof
|
||||
|
||||
|
||||
class OFModel:
|
||||
def __init__(self, root):
|
||||
self._root = root
|
||||
|
||||
def read_mesh(self):
|
||||
self._x, self._y, self._z = readof.readmesh(str(self._root))
|
||||
|
||||
def write_field(self, field, values):
|
||||
with open(self._root.joinpath("0", field), "r") as aw_file:
|
||||
aw_raw = aw_file.read()
|
||||
|
||||
with open(self._root.joinpath("0", field), "w") as aw_file:
|
||||
aw_file.write(
|
||||
re.sub(
|
||||
r"(?<=\(\n).*?(?=\n\))",
|
||||
"\n".join(values.astype(str)),
|
||||
aw_raw,
|
||||
count=1,
|
||||
flags=re.S,
|
||||
)
|
||||
)
|
||||
|
||||
@property
|
||||
def x(self):
|
||||
return self._x
|
||||
|
||||
@property
|
||||
def y(self):
|
||||
return self._y
|
||||
|
||||
@property
|
||||
def z(self):
|
||||
return self._z
|
||||
|
|
|
|||
|
|
@ -1,3 +1,22 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:673dcc99b9926720c32ee396b49a6599a28b9066812c7b651f2289d1527fe089
|
||||
size 667
|
||||
import pathlib
|
||||
import shutil
|
||||
import subprocess
|
||||
import tempfile
|
||||
|
||||
import numpy as np
|
||||
|
||||
|
||||
def stl_from_1d(data, output, scale=[1, 1, 1], translate=[0, 0, 0]):
|
||||
with tempfile.TemporaryDirectory() as tmppath:
|
||||
tmpdir = pathlib.Path(tmppath)
|
||||
np.savetxt(tmpdir.joinpath("data.dat"), np.stack((data, data)))
|
||||
with open(tmpdir.joinpath("scad"), "wt") as scad:
|
||||
scad.write(
|
||||
f"translate({translate})"
|
||||
f"scale({scale})"
|
||||
f"""surface("data.dat");"""
|
||||
)
|
||||
|
||||
subprocess.run(("openscad", "scad", "-o", "data.stl"), cwd=tmpdir)
|
||||
|
||||
shutil.copy2(tmpdir.joinpath("data.stl"), output)
|
||||
|
|
|
|||
|
|
@ -1,3 +1,36 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f12e993be338666db237374bcef3d50b16fe8c8f24f96425bdffb8d0adb47917
|
||||
size 977
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
|
||||
import numpy as np
|
||||
from scipy import interpolate
|
||||
|
||||
from .olaflow import OFModel
|
||||
|
||||
parser = argparse.ArgumentParser(
|
||||
description="Convert swash output to olaFlow input"
|
||||
)
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("sws_ola")
|
||||
|
||||
log.info("Starting sws -> olaFlow converter")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
sws_out = pathlib.Path(config.get("swash", "np_out"))
|
||||
x = np.load(sws_out.joinpath("xp.npy"))
|
||||
t = np.load(sws_out.joinpath("tsec.npy"))
|
||||
watl = np.load(sws_out.joinpath("watl.npy"))
|
||||
|
||||
olaflow_root = pathlib.Path(config.get("olaflow", "root"))
|
||||
model = OFModel(olaflow_root)
|
||||
model.read_mesh()
|
||||
|
||||
watl_t = interpolate.interp1d(x, watl[680])
|
||||
alpha_water = np.where(model.z < watl_t(model.x), 1, 0)
|
||||
|
||||
model.write_field("alpha.water", alpha_water)
|
||||
|
|
|
|||
|
|
@ -1,3 +1,21 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:956f0d07bcf91641f8397fda0a5620d6f32c4b12d2493bf161193d0d761b0335
|
||||
size 1267
|
||||
\chapter{Introduction}
|
||||
In February 2017, a \SI{50}{\tonne} concrete block was displaced by a wave onto
|
||||
the Artha breakwater in Saint-Jean-de-Luz. This event was captured by a
|
||||
photographer, and earlier work from \textcite{amir} allowed to extract the
|
||||
conditions under which this event happened using field data along with
|
||||
numerical modeling.
|
||||
|
||||
The goal of the present study is to establish a numerical model representing
|
||||
the conditions under which this block displacement event happened at the scale
|
||||
of the breakwater. The simulation will be performed using the olaFlow
|
||||
\parencite{olaFlow} model in a three-dimensionnal setting.
|
||||
|
||||
This study presents several aspects that are crucial to consider in order to
|
||||
obtain accurate results. The seastate that led to the studied event is known
|
||||
thanks to a wave buoy located in front of the breakwater \parencite{amir}.
|
||||
However, in order to input an accurate incident wave into the numerical model,
|
||||
it will be necessary to extract the incident and reflected waves from the raw
|
||||
buoy data. Then, it will be necessary to accurately model the Artha breakwater,
|
||||
especially regarding its porous character. Finally, the results of this
|
||||
simulation will need to be compared to the literature on block displacement by
|
||||
waves for validation.
|
||||
|
|
|
|||
|
|
@ -1,3 +1,612 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:d763f71644972bc7eb773eab17b84a25e94ece715cd5f2646071f2dadbdfaddd
|
||||
size 29718
|
||||
\chapter{Literature Review}
|
||||
|
||||
In this chapter, literature relevant to the present study will be reviewed.
|
||||
Three sections will be detailled: the separation of incident and reflected
|
||||
components from wave measurements, the modelisation of wave impacts on a
|
||||
rubble-mound breakwater, and the modelisation of block displacement by wave
|
||||
impacts.
|
||||
|
||||
\section{Separating incident and reflected components from wave buoy data}
|
||||
|
||||
\subsection{Introduction}
|
||||
|
||||
The separation of incident and reflected waves is a crucial step in numerically
|
||||
modeling a sea state. Using the raw data from a buoy as the input of a wave
|
||||
model will lead to incorrect results in the domain as the flow velocity at the
|
||||
boundary will not be correctly generated.
|
||||
|
||||
Several methods exist to extract incident and reflected components in measured
|
||||
sea states, and they can generally be categorised in two types of methods:
|
||||
array methods and PUV methods \parencite{inch2016accurate}. Array methods rely
|
||||
on the use of multiple measurement points of water level to extracted the
|
||||
incident and reflected waves, while PUV methods use co-located pressure and
|
||||
velocity measurements to separate incident and reflected components of the
|
||||
signal.
|
||||
|
||||
\subsection{Array methods}
|
||||
|
||||
\subsubsection{2-point methods}
|
||||
|
||||
Array methods were developped as a way to isolate incident and reflected wave
|
||||
components using multiple wave records.
|
||||
\textcite{goda1977estimation,morden1977decomposition} used two wave gauges
|
||||
located along the wave direction, along with spectral analysis, in order to
|
||||
extract the incident and reflected wave spectra. Their work is based on the
|
||||
earlier work of \textcite{thornton1972spectral}. \textcite{goda1977estimation}
|
||||
analyzed the wave spectrum components using the Fast Fourier Transform, and
|
||||
suggest that this method is adequate for studies in wave flumes. They noted
|
||||
that this method provides diverging results for gauge spacings that are
|
||||
multiples of half of the wave length. \textcite{morden1977decomposition}
|
||||
applies this technique to a field study, where the sea state is wind generated.
|
||||
\textcite{morden1977decomposition} showed that, using appropriate spectral
|
||||
analysis methods along with linear wave theory, the decomposition of the sea
|
||||
state into incident and reflected waves is accurate. A relationship between the
|
||||
maximum obtainable frequency and the distance between the sensors is provided.
|
||||
According to \textcite{morden1977decomposition}, the only needed knowledge on
|
||||
the wave environment is that wave frequencies are not modified by the
|
||||
reflection process.
|
||||
|
||||
\subsubsection{3-point methods}
|
||||
|
||||
In order to alleviate the limitations from the 2-point methods,
|
||||
\textcite{mansard1980measurement} introduced a 3-point method. The addition of
|
||||
a supplementary measurement point along with the use of a least-squares method
|
||||
most importantly provided less sensitivity to noise, non-linear interactions,
|
||||
and probe spacing. The admissible frequency range could also be widened. A
|
||||
similar method was proposed by \textcite{gaillard1980}. The accuracy of the
|
||||
method for the estimation of incident and reflected wave components was once
|
||||
again highlighted, while the importance of adequate positioning of the gauges
|
||||
was still noted.
|
||||
|
||||
\subsubsection{Time-domain method}
|
||||
|
||||
\textcite{frigaard1995time} presented a time-domain method for reflected and
|
||||
incident wave separation. This method, called SIRW method, used discrete
|
||||
filters to extract the incident component of an irregular wave field. The
|
||||
results were as accurate as with the method proposed by
|
||||
\cite{goda1977estimation}, while singularity points are better accounted for.
|
||||
The main advantage of the SIRW method is that it works in the time-domain,
|
||||
meaning that real time computations can be performed.
|
||||
\textcite{frigaard1995time} also mentions the possibility of replacing one of
|
||||
the wave gauges by a velocity meters to prevent singularities.
|
||||
|
||||
This method was improved by \textcite{baldock1999separation} in order to
|
||||
account for arbitrary bathymetry. Linear theory is used to compute shoaling on
|
||||
the varying bathymetry. Resulting errors in the computed reflection coefficient
|
||||
are low for large reflection coefficients, but increase with lower
|
||||
coefficients. The neglect of shoaling can lead to important error in many
|
||||
cases. The presented method could also be extended to three-dimensionnal waves
|
||||
and bathymetry by considering the influence of refraction.
|
||||
|
||||
\subsubsection{Further improvements}
|
||||
|
||||
Further additions were made to array methods. \textcite{suh2001separation}
|
||||
developped a method taking constant current into account to separate incident
|
||||
and reflected waves. This method relies on two or more gauges, using a least
|
||||
squares method. Results are very accurate in the absence of noise, but a small
|
||||
amount of error appears when noise is added.
|
||||
|
||||
\textcite{inch2016accurate} confirmed that the presence of noise led to
|
||||
overestimation of the reflection coefficient. The creation of bias lookup
|
||||
tables is proposed in order to account for noise-induced error in reflection
|
||||
coefficient estimations.
|
||||
|
||||
\textcite{andersen2017estimation,roge2019estimation} later proposed
|
||||
improvements to account for highly non-linear regular and irregular waves
|
||||
respectively. The improved method provides very accurate results for highly
|
||||
non-linear waves, but are expected to be unreliable in the case of steep
|
||||
seabeds, as shoaling is not part of the underlying model.
|
||||
|
||||
\subsubsection{Conclusion}
|
||||
|
||||
Array methods have been developped enough to provide accurate results in a wide
|
||||
range of situations. Sensibility to noise has been reduced, and the influence
|
||||
of shoaling has been considered. Those methods can also be applied to irregular
|
||||
non-linear waves.
|
||||
|
||||
However, they require at least two wave gauges to be used. That means that in
|
||||
some situations such as the Saint-Jean-de-Luz event of 2017, other methods are
|
||||
needed since only one field measurement location is available.
|
||||
|
||||
\subsection{PUV methods}
|
||||
|
||||
The goal of PUV methods is to decompose the wave field into incident and
|
||||
reflected waves using co-located wave elevation and flow velocity measurements
|
||||
\parencite{tatavarti1989incoming}. \textcite{tatavarti1989incoming} presented a
|
||||
detailled analysis of separation of incoming and outging waves using co-located
|
||||
velocity and wave height sensors. Their method allows to obtain the reflection
|
||||
coefficient relative to frequency, as well as to separate incident and
|
||||
reflected wave components. Compared to array methods, this method also strongly
|
||||
reduces the influence of noise.
|
||||
|
||||
\textcite{kubota1990} studied the influence of the considered wave theory on
|
||||
incident and reflected wave separation. Three methods, based on linear
|
||||
long-wave theory, small-amplitude wave theory and quasi-nonlinear long-wave
|
||||
theory respectiveley were developped and compared. The results show that the
|
||||
quasi-nonlinear approach gave the most accurate results.
|
||||
|
||||
%\textcite{walton1992} applied a separation method based on co-located pressure
|
||||
%and velocity measurements on field, studying two natural beaches. This study
|
||||
%showed that reflection is not significant on natural beaches. Additionnaly,
|
||||
%the method that is used allowed for larger reflected energy than incident
|
||||
%energy.
|
||||
|
||||
Research by \textcite{hughes1993} showed how co-located horizontal velocity and
|
||||
vertical velocity (or pressure) sensors can be used to extract incident and
|
||||
reflected wave spectra. Their method is based on frequency domain linear
|
||||
theory, and provided accurate results for full reflection of irregular
|
||||
non-breaking waves. Low-reflection scenarii were evaluated against the results
|
||||
from \textcite{goda1977estimation}, and showed good agreement between both
|
||||
methods. \textcite{hughes1993} also highlights that reflection estimates are
|
||||
unreliable for higher frequencies, where coherency between the two measured
|
||||
series is lower.
|
||||
|
||||
Following the work of \textcite{tatavarti1989incoming},
|
||||
\textcite{huntley1999use} showed how principal component analysis can alleviate
|
||||
noise-induced bias in reflection coefficient calculations compared to
|
||||
time-domain analysis. They also stuied the influence of imperfect collocation
|
||||
of the sensors, showing that the time delay between sensors leads to a peak in
|
||||
the reflection coefficient at a frequency related to this time delta.
|
||||
|
||||
% \cite{sheremet2002observations}
|
||||
|
||||
\subsection{Conclusion}
|
||||
|
||||
Numerous methods have been developped in order to separate incident and
|
||||
reflected components from wave measurements. Array methods rely on the use of
|
||||
multiple, generally aligned, wave gauges, while PUV methods rely on the use of
|
||||
co-located sensors, generally a wave height sensor and a horizontal velocity
|
||||
sensor. Array methods generally have the advantage of being more cost-effective
|
||||
to implement, as the cost of reliable velocity measurement devices can be
|
||||
important \parencite{hughes1993}. Nevertheless, PUV methods are generally more
|
||||
accurate regarding noise, varying bathymetry, and can be setup closer to
|
||||
reflective surfaces \parencite{hughes1993,inch2016accurate}.
|
||||
|
||||
In the case of the 2017 event on the Artha breakwater, the results from a
|
||||
single wave gauge are available, which means that the array methods are not
|
||||
applicable. A PUV method \parencite{tatavarti1989incoming,huntley1999use}
|
||||
should then be used to evaluate the reflection coefficient of the Artha
|
||||
breakwater and to separate the incident and reflected wave components from the
|
||||
measured data.
|
||||
|
||||
\section{Modelling wave impact on a breakwater}
|
||||
|
||||
\subsection{Introduction}
|
||||
|
||||
Modelling rubble-mound breakwaters such as the Artha breakwater requires
|
||||
complex considerations on several aspects. First of all, an accurate of the
|
||||
fluid's behavior in the porous armour of the breakwater is necessary. Then,
|
||||
adequate turbulence models are needed in order to obtain accurate results.
|
||||
Several types of models have been developped that can be used to study breaking
|
||||
wave flow on a porous breakwater.
|
||||
|
||||
\subsection{SPH models}
|
||||
|
||||
\subsubsection{Introduction}
|
||||
|
||||
Smoothed-Particle Hydrodynamics (SPH) models rely on a Lagrangian
|
||||
representation of the fluid \parencite{violeau2012fluid}. These models are
|
||||
meshless, and work by considering fluids as a collection of particles.
|
||||
|
||||
SPH models have been shown to provide satisfactory results for the modeling of
|
||||
turbulent free surface flows \parencite{violeau2007numerical}. Additionnaly,
|
||||
\textcite{dalrymple2006numerical} showed that SPH models can be used in small
|
||||
scale models of water waves. In this part, literature on modeling flow in
|
||||
porous media and the adequate boundary conditions for wave modeling will be
|
||||
reviewed.
|
||||
|
||||
\subsubsection{Porosity modelling}
|
||||
|
||||
Multiple approaches can be used when modeling porous media using SPH models.
|
||||
The most obvious approach relies on the use of discrete elements in the porous
|
||||
domain. For instance, \textcite{altomare2014numerical} showed that an SPH model
|
||||
along with discrete modeling of the blocks composing a breakwater could yield
|
||||
satisfactory results. The meshless character of SPH models allows for modeling
|
||||
the large scale outside the porous media and the small scale of the space
|
||||
between blocks effectively.
|
||||
|
||||
Nevertheless, the more common approach is to use a macro-scale model in porous
|
||||
media, in which the porous domain is considered to have a set of homogeneous
|
||||
properties.
|
||||
\textcite{jiang2007mesoscale} used randomly placed fixed particles in the
|
||||
porous media in order to model porosity at a microscopic scale from mesoscopic
|
||||
porosity properties. The resulting model showed reliable results in studying
|
||||
the flow through porous media.
|
||||
|
||||
By contrast, \textcite{shao2010} used volume-averaged Navier-Stokes equations
|
||||
along with an averaged porosity model
|
||||
\parencite{huang2003structural,burcharth1995one} in an incompressible SPH
|
||||
(ISPH) model in order to model wave flow in porous media, accounting for a
|
||||
linear and quadratic term in porosity induced friction. Turbulence was modeled
|
||||
with a $k-\varepsilon$ volume averaged model. Good agreement was highlighted
|
||||
between the results from this model and other models, analytical results and
|
||||
experimental measurements for solitary and regular waves interacting with a
|
||||
porous breakwater.
|
||||
|
||||
Similarly, \textcite{ren2016improved} presents a weakly-compressible SPH
|
||||
(WCSPH) model using the volume averaged Favre averaged Navier-Stokes (VAFANS)
|
||||
equations along with a large Eddy simulation (LES, \cite{ren2014numerical})
|
||||
turbulence model. Interaction between turbulent flows and porous media is
|
||||
studied and good agreement is shown between model results and experimental
|
||||
data. Additionnaly, it is highlighted that the addition of the turbulence model
|
||||
does increase the accuracy of the model. Similar results are found by
|
||||
\textcite{wen2016sph} when studying wave impact on non-porous structures using
|
||||
the same model.
|
||||
|
||||
That model was then extended to a three-dimensional model by
|
||||
\textcite{wen20183d}. The computed free surface and forces on a structure were
|
||||
shown to be accurately predicted by the 3D model.
|
||||
|
||||
%\paragraph{Notes}
|
||||
%
|
||||
%\cite{jiang2007mesoscale}: Meso-scale SPH model of flow in isotropic porous
|
||||
%media; randomly placed particles with repulsive force; reasonable results.
|
||||
%
|
||||
%\cite{shao2010}: incompressible flow with porous media; Navier-Stokes,
|
||||
%Volume-Averaged $k-\varepsilon$; porosity model is same as
|
||||
%\cite{troch1999development} but without inertia term
|
||||
%\parencite{huang2003structural}
|
||||
%
|
||||
%\cite{altomare2014numerical} "microscopic" model of breakwater
|
||||
%
|
||||
%\cite{kunz2016study} comparison of sph model with micro-model experiments; not
|
||||
%quite applicable
|
||||
%
|
||||
%\textbf{\cite{ren2016improved}} VAFANS equations to solve incompressible
|
||||
%turbulent flow with porous media. Same porosity model as \cite{shao2010}
|
||||
%
|
||||
%\cite{wen2016sph}
|
||||
%
|
||||
%\cite{pahar2016modeling}
|
||||
%\cite{peng2017multiphase}
|
||||
%\cite{wen20183d}: 3D VAFANS
|
||||
%\cite{kazemi2020sph}
|
||||
|
||||
\subsubsection{Wave generation}
|
||||
|
||||
One of the more recent research subject with SPH models has been wave
|
||||
generation. Wave paddles were initially used as a way to generate waves in
|
||||
numerical basins \parencite{zheng2010numerical}, with the major drawback of
|
||||
such wave makers begin their high reflectivity.
|
||||
|
||||
\textcite{liu2015isph} proposed an improved wave generator using a momentum
|
||||
source in an ISPH model. The use of a momentum source was a major improvement
|
||||
as it enabled the use of non-reflective wave generators. The proposed solution
|
||||
was developed for two-dimensional linear waves, but the same algorithm could be
|
||||
used for three-dimensional models.
|
||||
|
||||
\textcite{altomare2017long} presented a wave generation method for long-crested
|
||||
(second order) waves in a WCSPH model using a piston wave maker. Although this
|
||||
method leads to high reflection, the possibility of generating irregular
|
||||
waves was highlighted.
|
||||
|
||||
Similarly to \textcite{liu2015isph}, \textcite{wen2018non} proposed a wave
|
||||
generation method using a momentum source to create a non reflective wave
|
||||
maker. The proposed method was used for generating regular as well as random
|
||||
waves in a flume, and could be extended to three-dimensional simulations.
|
||||
Nevertheless, the method proposed was limited to linear wave theory.
|
||||
|
||||
%\cite{zheng2010numerical}
|
||||
%
|
||||
%\cite{liu2015isph}: 2D non-reflective linear wave generator using a momentum
|
||||
%source in ISPH
|
||||
%
|
||||
%\cite{altomare2017long}: Wave generation and absorption of long-crested waves
|
||||
%(2nd order) in WCSPH. Generation of monochromatic as well as irregular waves.
|
||||
%
|
||||
%\cite{wen2018non}: Non reflective spectral wave maker, using momentum source
|
||||
|
||||
\subsubsection{Conclusion}
|
||||
|
||||
SPH models have been showed to be extremely powerful tools in modelling
|
||||
wave-structure interaction, due to their ability to model complex interfaces
|
||||
and highly dynamic situations \parencite{altomare2017long}.
|
||||
|
||||
Modeling wave interaction with porous structures using SPH models has been
|
||||
widely studied, and generally adequate results are obtained
|
||||
\parencite{wen20183d}. Nonetheless, SPH models still face some limitations
|
||||
regarding their ability to represent incompressible flows, leading to high
|
||||
diffusivity \parencite{higuera2015application}.
|
||||
|
||||
Moreover, wave-generation techniques, especially for long simulations, are
|
||||
still at an early stage of developement \parencite{wen2018non}, limiting the
|
||||
applicability to such models in studying real cases using in-situ data.
|
||||
|
||||
\subsection{VOF models}
|
||||
|
||||
\subsubsection{Introduction}
|
||||
|
||||
Contrary to SPH models, the volume of fluid (VOF) method relies on a Eulerian
|
||||
representation of the fluid \parencite{hirt1981volume}. This method uses a
|
||||
marker function, the value of which represents the fraction of fluid in a mesh
|
||||
cell.
|
||||
|
||||
\subsubsection{2D models}
|
||||
|
||||
Using the VOF method along with Navier-Stokes equations, several models have
|
||||
been developed in order to model fluid dynamics around porous structures.
|
||||
\textcite{van1995wave} first implemented 2D-V incompressible Navier-Stokes
|
||||
equations using the VOF method while accounting for porous media. The results
|
||||
of the numerical model were validated with analytical solutions for simple
|
||||
cases, as well as physical model tests. The model yielded acceptable results,
|
||||
but the representation of turbulence and air-extrusion still required
|
||||
improvement.
|
||||
|
||||
\textcite{troch1999development} developed the VOFbreak\textsuperscript{2} model
|
||||
in order to provide improvements to earlier models. The Forchheimer theory
|
||||
\parencite{burcharth1995one} is used in order to model the behavior of the flow
|
||||
inside porous media. The hydraulic gradient generated in porous media is
|
||||
decomposed as a linear term, a quadratic term, and an inertia term. Those terms
|
||||
are ponderated by three coefficients that need to be calibrated. Several
|
||||
attempts have been made to obtain analytical formulas for those
|
||||
\parencite{burcharth1995one,van1995wave}, but no universal result has been
|
||||
provided for the inertia term in particular. \textcite{vieira2021novel}
|
||||
additionnaly proposed using artificial neural networks in order to calibrate
|
||||
those values, which are generally calibrated using experimental results.
|
||||
|
||||
Parallely, \textcite{liu1999numerical} created a new model (COBRAS) that used
|
||||
the VOF method. The model is based on the combination of Reynolds averaged
|
||||
Navier-Stokes (RANS) equations and a $k-\varepsilon$ turbulence model. The
|
||||
porous media is modelled similarly to \textcite{troch1999development}. The
|
||||
offered results were improved compared to earlier models as more a more
|
||||
accurate consideration of turbulence outside porous media was added. This model
|
||||
was further improved by \textcite{hsu2002numerical} in order to account for
|
||||
small scale turbulence inside the porous media thanks to volume averaged RANS
|
||||
(VARANS) equations.
|
||||
|
||||
The COBRAS model was then reworked by
|
||||
\textcite{losada2008numerical,lara2008wave} to add improvements to wave
|
||||
generation and usability. The main difference between this new code (COBRAS-UC)
|
||||
and COBRAS is the addition of irregular waves generation. The code was also
|
||||
optimized to reduce the number of iterations. The improvements allowed for
|
||||
longer simulations to be computed. The predictions for free surface elevation
|
||||
and pressure in front of a porous breakwater were accurate, but improvements
|
||||
were still needed, in particular considering computation time.
|
||||
|
||||
\subsubsection{3D models}
|
||||
|
||||
The combination of VARANS equations and the VOF method was then brought to 3D
|
||||
domains by \textcite{del2011three} in IH3VOF. Specific boundary conditions were
|
||||
also added for several wave theories. Additionnaly, an improved turbulence
|
||||
model was used ($\omega$-SST model, \cite{menter1994two}), which provides
|
||||
strongly improved results in zones where strong pressure gradients appear.
|
||||
Strong agreement between IH3VOF and experimental results was obtained, but the
|
||||
need for accurate boundary conditions limited the applicability of the model.
|
||||
|
||||
\textcite{higuera2015application} reworked the equations from
|
||||
\textcite{del2011three} as discrepancies were observed with earlier literature
|
||||
and added several improvements to the model. Notably, time-varying porosity was
|
||||
added in order to account for eventual sediment displacement. New boundary
|
||||
conditions were added, with static and dynamic boundary wave generators as well
|
||||
as passive and acive wave absorption being implemented. The resulting model
|
||||
(IHFOAM/olaFlow, \cite{olaFlow}) was implemented in the OpenFOAM toolbox.
|
||||
|
||||
\subsubsection{Conclusion}
|
||||
|
||||
VOF models have been developped to provide accurate results for the study of
|
||||
wave impact on porous structures. The validation results from
|
||||
\textcite{higuera2015application} show the capabilities of such models in
|
||||
accurately representing rubble-mound breakwaters subject to irregular
|
||||
three-dimensional wave fields.
|
||||
|
||||
Nonetheless, the representation of porosity in those models is still mainly
|
||||
based on experimental calibration, particularly for the inertia term of
|
||||
porosity induced friction.
|
||||
|
||||
%\subsection{Conclusion}
|
||||
|
||||
%\paragraph{Notes}
|
||||
%
|
||||
%\cite{van1995wave,troch1999development}
|
||||
%
|
||||
%COBRAS \parencite{liu1999numerical}: spatially averaged RANS
|
||||
%with $k-\varepsilon$ turbulence model. Drag forces modeled by empirical linear
|
||||
%and non-linear friction terms; \cite{hsu2002numerical}: introduced VARANS in
|
||||
%order to account for small scale turbulence inside the porous media.
|
||||
%->
|
||||
%COBRAS-UC/IH2VOF \parencite{losada2008numerical,lara2008wave}: VOF VARANS (2D);
|
||||
%refactor of COBRAS code, with improved wave generation, improvement of input
|
||||
%and output data.
|
||||
%->
|
||||
%IH3VOF \parencite{del2011three}: 3D VOF VARANS, updated porous media equations,
|
||||
%optimization of accuracy vs computation requirements, specific boundary
|
||||
%conditions, validation. Adding SST model.
|
||||
%->
|
||||
%IHFOAM/olaFlow \parencite{higuera2015application}: Rederivation of
|
||||
%\cite{del2011three}, add time-varying porosity; Improvement to wave generation
|
||||
%and absorption; implementation in OpenFOAM; extensive validation; application
|
||||
%to real coastal structures.
|
||||
%
|
||||
%\cite{vieira2021novel}: Use of artificial neural networks to determine porosity
|
||||
%parameter for VOF VARANS model.
|
||||
|
||||
%\subsection{Other}
|
||||
%
|
||||
%BEM: \cite{hall1994boundary,koley2020numerical}
|
||||
|
||||
\section{Block displacement by waves}
|
||||
|
||||
\subsection{Introduction}
|
||||
|
||||
Displacement of blocks or boulders by waves has been a major topic in
|
||||
understanding the influence of storm and tsunami waves in coastal regions.
|
||||
Several approaches have been taken to study this phenomenon.
|
||||
|
||||
% In a first part, we will discuss in-situ studies on displaced boulders. In a
|
||||
% second part, we will review models of block displacements.
|
||||
|
||||
\subsection{Block displacement models}
|
||||
|
||||
The main goal of studying boulder displacement is generally to establish the
|
||||
cause of boulder deposits in coastal areas. \textcite{nott1997extremely} was
|
||||
among the first to propose hydrondynamic equations that aimed to calculate the
|
||||
wave height that would lead to the displacement of a boulder for storm and
|
||||
tsunami waves. The main difference between storm and tsunami waves in those
|
||||
equations was the flow velocity relative to wave height. The calculation of the
|
||||
minimum flow velocity for boulder transport is obtained by calculating an
|
||||
equilibrium between drag, lift and restraining forces.
|
||||
|
||||
Those equations were refined by \textcite{nott2003waves} in order to account
|
||||
for the pre-transport environment of the boulder. \citeauthor{nott2003waves}
|
||||
derived equations for submerged, sub-aerial and joint bounder boulders. A new
|
||||
parameter ($\delta$) was introduced to differentiate between tsunami and storm
|
||||
waves. This study highlights the importance of the initial environment of a
|
||||
boulder for wave transport conditions. Compared to the equations from
|
||||
\textcite{nott1997extremely}, an aditionnal inertia term is added to the
|
||||
equilibrium equation for sub-aerial boulders, while the drag force is removed
|
||||
for joint-bounded blocks.
|
||||
|
||||
\textcite{nandasena2011reassessment} noted that \citeauthor{nott2003waves}'s
|
||||
equations could be improved, and proposed a new set of equations correcting
|
||||
the lift and inertia terms in \citeauthor{nott2003waves}'s equations.
|
||||
\textcite{nandasena2011reassessment} found that the new equations produced up
|
||||
to a \SI{65}{\percent} difference with \citeauthor{nott2003waves}'s equations.
|
||||
|
||||
\textcite{buckley2012inverse} proposed alternative equations for sliding and
|
||||
overturning of submerged boulders. An equation for block sliding was introduced
|
||||
by considering friction on the bed. \textcite{weiss2012mystery} investigated
|
||||
the influence of bed roughness on block displacement. A new stability criteria
|
||||
was established, and bed roughness was found to be a major factor in boulder
|
||||
displacement. In contrast with the findings from \textcite{nott2003waves}, the
|
||||
threshold wave amplitude for block displacement was found to be similar between
|
||||
tsunami and storm waves.
|
||||
|
||||
\textcite{nandasena2013boulder,liu2014experimental} performed experimental
|
||||
studies of block displacement using dam break scenarios in a flume. The results
|
||||
from both studies indicate that the primary mode of boulder motion for large
|
||||
boulders is sliding, rather than rolling or saltation.
|
||||
|
||||
\textcite{weiss2015untangling} highlights inadequacies in the criteria that are
|
||||
generally used \parencite{nott2003waves,nandasena2011reassessment}. According
|
||||
to \textcite{weiss2015untangling}, the use of a minimum threshold on block
|
||||
movement does not account for the possibility of a block returning to its
|
||||
initial position after being slightly disloged. A new threshold is proposed on
|
||||
the minimal movement of a block, while considering the time-dependent nature of
|
||||
wave-induced flow. \textcite{weiss2015untangling} also shows the importance of
|
||||
the pre-transport conditions on block displacement.
|
||||
|
||||
\textcite{kennedy2017extreme} derived new equations following the approach from
|
||||
\textcite{nandasena2011reassessment} accounting for non-parallelepipedic
|
||||
blocks. The revised equations led to a lower velocity threshold for block
|
||||
movement. This highlights the importance of boulder shape in displacement
|
||||
considerations.
|
||||
|
||||
\textcite{lodhi2020role} highlighted the importance of hydrodynamic pressure in
|
||||
block displacement. A new equation was given for the threshold flow velocity
|
||||
for block movement. An experimental validation of the models was performed, and
|
||||
showed the overestimation of the threshold velocity by previous models.
|
||||
|
||||
\textcite{oetjen2021experiments} performed a review of boulder displacement
|
||||
experiments. They found that the initial position of boulders relative to the
|
||||
wave impact has a major influence on block displacement. Conversely, the
|
||||
influence of bed roughness seems to have been overestimated in the past.
|
||||
Similarly to \textcite{lodhi2020role}, \textcite{oetjen2021experiments}
|
||||
highlights an overestimation of minimum wave height for block displacement by
|
||||
earlier equations \parencite{nott1997extremely,nandasena2011reassessment}.
|
||||
|
||||
\subsection{Breakwater stability}
|
||||
|
||||
Breakwater stability has been a central issue in breakwater design.
|
||||
\textcite{hudson1959laboratory} showed that Iribarren's formula could be used
|
||||
to design breakwater when combined with an experimental parameter depending on
|
||||
the shape of armour blocks and the geometry of the armour layer. A no-damage
|
||||
and no-overtopping criteria is provided and validate using experimental
|
||||
results. \textcite{losada1979joint} noted that Iribarren's criterion was fairly
|
||||
accurate, but the results from \textcite{hudson1959laboratory} are found to be
|
||||
too conservative.
|
||||
|
||||
\textcite{van1987stability} proposed an new criterion regarding breakwater
|
||||
stability under random wave action. Extensive experimental validation using
|
||||
both small-scale and large-scale models was conducted, and seem to provide
|
||||
coherent results. Similarly to earlier work, the criterion is provided as an
|
||||
dimensionless form.
|
||||
|
||||
\textcite{galland1995rubble} observed that armour stability relative to oblique
|
||||
waves was increased. \textcite{van2014oblique} confirmed the influence of wave
|
||||
direction on stability, and provided a way of estimating breakwater stability
|
||||
depending on wave orientation.
|
||||
|
||||
%\cite{hudson1959laboratory}
|
||||
%
|
||||
%%\cite{hudson1975reliability}
|
||||
%
|
||||
%\cite{losada1979joint}
|
||||
%
|
||||
%\cite{van1987stability}
|
||||
%
|
||||
%\cite{van1995conceptual}
|
||||
%
|
||||
%\cite{galland1995rubble}
|
||||
%
|
||||
%\cite{iglesias2008virtual}
|
||||
%
|
||||
%\cite{etemad2012stability}
|
||||
%
|
||||
%\cite{van2014oblique}
|
||||
|
||||
\subsection{Conclusion}
|
||||
|
||||
Block displacement by waves has been widely studied in the literature.
|
||||
Nevertheless, most validation has been conducted using laboratory experiments,
|
||||
and reliable real-world data on that subject is scarce. This highlights the
|
||||
opportunity provided by the 2017 Saint-Jean-de-Luz event, as the availability
|
||||
of in-situ data allows for real-world validation of the results from earlier
|
||||
research.
|
||||
|
||||
%\subsection{In-situ studies}
|
||||
%
|
||||
%\cite{barbano2010large}: boulders deposity in Sicily -> probably tsunamis
|
||||
%
|
||||
%\cite{paris2011}:
|
||||
%
|
||||
%\cite{nandasena2011numerical}
|
||||
%\cite{may2015block}
|
||||
%\cite{biolchi2016}
|
||||
%\cite{kennedy2016observations}
|
||||
%\cite{erdmann2018boulder}
|
||||
%\cite{cox2018extraordinary}
|
||||
%
|
||||
%\subsection{Models}
|
||||
%
|
||||
%\cite{nott1997extremely}
|
||||
%
|
||||
%\cite{nott2003waves} Submerged boulder:
|
||||
%\begin{equation}
|
||||
%u^2 \ge \frac{2\left(\frac{\rho_s}{\rho_w}-1\right)ag}
|
||||
%{C_d\left(\frac{ac}{b^2}\right)+C_l}
|
||||
%\end{equation}
|
||||
%
|
||||
%\cite{imamura2008numerical}
|
||||
%\cite{barbano2010large}
|
||||
%\cite{nandasena2011numerical}
|
||||
%
|
||||
%\cite{nandasena2011reassessment}
|
||||
%\begin{equation}
|
||||
%u^2 \ge \frac{2\left(\frac{\rho_s}{\rho_w}-1\right) gc
|
||||
%\left(\cos\theta+\frac{c}{b}\sin\theta\right)}
|
||||
%{C_d\frac{c^2}{b^2}+C_l}
|
||||
%\end{equation}
|
||||
%
|
||||
%\cite{buckley2012inverse}
|
||||
%\cite{weiss2012mystery}
|
||||
%\cite{nandasena2013boulder}
|
||||
%\cite{liu2014experimental}
|
||||
%\cite{weiss2015untangling}
|
||||
%
|
||||
%
|
||||
%\cite{kennedy2016observations}
|
||||
%\cite{kennedy2017extreme}
|
||||
%\cite{weiss2017toward}
|
||||
%
|
||||
%\cite{bressan2018laboratory} Partially submerged boulders
|
||||
%\begin{equation}
|
||||
%u^2 \ge \frac{2b_wW}{\rho_w\left(b_DC_DA_{wfs}+b_LC_LA_{wbs}\right)}
|
||||
%\end{equation}
|
||||
%
|
||||
%\cite{lodhi2020role}
|
||||
%\cite{oetjen2020significance}
|
||||
%
|
||||
%\cite{oetjen2021experiments}: Review
|
||||
%
|
||||
%---
|
||||
%\cite{zainali2015boulder}: Numerical model of block displacement
|
||||
|
|
|
|||
268
report/cours.sty
268
report/cours.sty
|
|
@ -1,3 +1,265 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
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|
||||
size 7708
|
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|
||||
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|
||||
|
||||
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|
||||
%%%%% Packages
|
||||
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|
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|
||||
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
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|
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
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|
||||
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|
||||
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||||
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||||
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||||
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||||
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%%%%% Macros
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|
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|
||||
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|
||||
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|
||||
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|
||||
|
||||
%%% Symboles
|
||||
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|
||||
\newcommand\bepsilon{\boldsymbol\epsilon}
|
||||
\newcommand\btheta{\boldsymbol\theta}
|
||||
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|
||||
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|
||||
%\renewcommand\C{\coulomb}
|
||||
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|
||||
|
||||
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|
||||
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|
||||
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|
||||
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|
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|
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
|
||||
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|
||||
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|
||||
|
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%%% Exposant / Indice à gauche
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|
||||
|
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|
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|
||||
\newcommand\ov[1]{\overline{#1}}
|
||||
|
||||
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
|
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%%%%% Paramétrage des packages
|
||||
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%% Styles de théorèmes
|
||||
\theoremstyle{remark}
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||||
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|
||||
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|
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\theoremstyle{definition}
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%%% Listings (code)
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alsoletter=>
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|
||||
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|
||||
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|
||||
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|
||||
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%%% SIUnitX
|
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||||
forbid-literal-units,
|
||||
sticky-per,
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||||
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||||
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||||
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||||
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||||
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||||
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||||
|
||||
|
||||
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|
||||
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|
||||
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|
||||
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||||
a4paper,
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||||
total={16cm, 24cm}
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||||
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|
||||
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|
||||
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||||
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|
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|
||||
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||||
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
{\chaptertitlename~\thechapter}{12pt}{\interlight\Huge}
|
||||
|
||||
|
||||
\newcommand\email[1]{\href{mailto:#1}{#1}}
|
||||
|
||||
|
||||
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|
||||
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|
||||
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|
||||
|
||||
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|
||||
% \renewcommand\thesection{\Roman{section}}
|
||||
% \renewcommand\thesubsection{\thesection.\arabic{subsection}}
|
||||
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|
||||
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|
||||
|
||||
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||||
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||||
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|
||||
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|
||||
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|
||||
|
||||
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|
||||
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|
||||
|
||||
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|
||||
|
||||
|
||||
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
|
||||
%%%%% Fonctions pgfplots
|
||||
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
|
||||
\makeatletter
|
||||
\pgfmathdeclarefunction{erf}{1}{%
|
||||
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|
||||
\pgfmathparse{#1 > 0 ? 1 : -1}%
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
1 - (((((1.061405429*\t -1.453152027)*\t) + 1.421413741)*\t
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||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
|
|
|
|||
|
|
@ -1,3 +1,4 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:3047470c95f5c13dbcff0657817424cc60b912754ad0fcfe3ae969be252d3c01
|
||||
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|
||||
[latex]
|
||||
engine=xelatex
|
||||
main=main.tex
|
||||
out=report.pdf
|
||||
|
|
|
|||
1178
report/library.bib
1178
report/library.bib
File diff suppressed because it is too large
Load diff
|
|
@ -1,3 +1,44 @@
|
|||
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||||
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||||
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|
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|
||||
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|
||||
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|
||||
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
|
||||
\hypersetup{
|
||||
pdftitle = {M2 Internship},
|
||||
pdfauthor = {Edgar P. Burkhart},
|
||||
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|
||||
|
||||
\title{\interlight\huge M2 Internship\\{\Huge Bibliography review}\\
|
||||
\vspace{1em} Simulation of the breaking wave flow which generated the 50T
|
||||
concrete block displacement at the Artha breakwater on February 28, 2017}
|
||||
\author{\Large Edgar P.
|
||||
Burkhart\thanks{\email{edgar-pierre.burkhart@etud.univ-pau.fr},
|
||||
\email{edgar.burkhart@ens-paris-saclay.fr}.}}
|
||||
\affil{Université de Pau et des Pays de l'Adour}
|
||||
\affil{École Normale Supérieure Paris-Saclay}
|
||||
\date{February 2022}
|
||||
|
||||
\setcounter{tocdepth}{3}
|
||||
|
||||
\begin{document}
|
||||
\frontmatter
|
||||
\maketitle
|
||||
|
||||
\tableofcontents
|
||||
|
||||
\mainmatter
|
||||
%\include{notes/bibliography_research}
|
||||
\include{chapters/introduction}
|
||||
\include{chapters/literature}
|
||||
|
||||
\backmatter
|
||||
%\nocite{*}
|
||||
\defbibnote{bibstyle}{\emph{Bibliographic style: ISO690 Author-Year.}}
|
||||
\printbibliography[prenote=bibstyle]
|
||||
\end{document}
|
||||
|
|
|
|||
|
|
@ -1,3 +1,69 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:d2758378f678604e9cd2f59edeeed3d1a67d4b03ef711f2bf081909b57454901
|
||||
size 2606
|
||||
\chapter{Bibliography research}
|
||||
\section{Extracting components from buoy data}
|
||||
\paragraph{incident and reflected wave separation}
|
||||
\cite{mansard1980measurement}: extract incident and reflected spectra from
|
||||
spectrum measurements at three different points.
|
||||
\cite{suh2001separation,frigaard1995time,baldock1999separation,
|
||||
roge2019estimation,andersen2017estimation}
|
||||
|
||||
\paragraph{incident and reflected wave separation single gauge}
|
||||
\paragraph{incident and reflected wave separation puv method}
|
||||
Probablement très intéressant: \cite{inch2016accurate}:
|
||||
\cite{sheremet2002observations,guza1977resonant}
|
||||
Très bien: \cite{huntley1999use,tatavarti1989incoming}
|
||||
|
||||
\cite{pedersen2007resolving}
|
||||
\paragraph{puv method}
|
||||
\cite{sobey1999locally}
|
||||
\paragraph{artha breakwater reflection}
|
||||
\cite{poncet2020wave,larroque2018situ}
|
||||
|
||||
\section{Reflection}
|
||||
\paragraph{wave reflection analysis}
|
||||
\cite{davidson1996new}
|
||||
|
||||
\section{Modeling wave impact on porous media}
|
||||
\paragraph{olaFlow}
|
||||
\cite{olaFlow,higuera2015application}: \cite{bogdanov2011direct,del2011three}
|
||||
|
||||
\section{Breakwater modeling}
|
||||
\paragraph{modelling breakwater} sph: \cite{altomare2014numerical} (SPH);
|
||||
|
||||
\paragraph{rubble-mound breakwater model} \cite{vanneste20152d} (RANS)
|
||||
\cite{sumer2000experimental} (experimental)
|
||||
\cite{kim2005neural} (neural networks for breakwater design)
|
||||
\cite{troch1999development} (VOFbreak, NS)
|
||||
\cite{koley2020numerical}
|
||||
\cite{losada1979joint}
|
||||
\cite{lara2008wave} (COBRAS-UC, VARANS)
|
||||
\cite{losada2008numerical} (COBRAS-UC, VARANS)
|
||||
|
||||
\paragraph{breakwater model} \cite{hsu2002} (VARANS)
|
||||
|
||||
\section{Modeling}
|
||||
\paragraph{using wave buoy data in numerical models} \cite{thomas2015,
|
||||
mentaschi2013,rusu2011}
|
||||
|
||||
\section{Block displacement}
|
||||
\paragraph{boulder transport by waves} \cite{erdmann2018boulder,may2015block,
|
||||
weiss2012mystery,weiss2015untangling,zainali2015boulder,zainali2016high}
|
||||
\paragraph{boulder transport flow} \cite{nandasena2011reassessment,
|
||||
nandasena2013boulder,martinez2011quasi,kennedy2016observations,lodhi2020role,
|
||||
oetjen2021experiments,oetjen2020significance}
|
||||
\paragraph{storm waves boulder interaction} \cite{nandasena2011numerical}
|
||||
Très intéressant: \cite{weiss2017toward},
|
||||
\cite{sheremet2002observations,sheremet2016triads}
|
||||
\paragraph{block transport by waves} \cite{imamura2008numerical,
|
||||
barbano2010large,paris2011,biolchi2016}
|
||||
|
||||
\section{GPS buoys}
|
||||
\paragraph{Datawell DWR-G reflected wave} \cite{herbers2012observing}
|
||||
|
||||
\paragraph{gps wave buoy reflected wave} \cite{doong2011wave}
|
||||
|
||||
\section{Other}
|
||||
\cite{miche1951}
|
||||
|
||||
\cite{isobe1985method}
|
||||
\section{Flow in porous media}
|
||||
\paragraph{wave flow porous media} \cite{shao2010}
|
||||
|
|
|
|||
6
swash/.gitignore
vendored
6
swash/.gitignore
vendored
|
|
@ -1,3 +1,3 @@
|
|||
version https://git-lfs.github.com/spec/v1
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oid sha256:483eba7c2aaf6013155873bc675ab40e96c433a9c31b8dd056af8049c1f7d3c7
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||||
size 31
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||||
/inp*
|
||||
/out*
|
||||
/swash_buoytoartha
|
||||
|
|
|
|||
|
|
@ -1,3 +1,28 @@
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|||
version https://git-lfs.github.com/spec/v1
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|
||||
size 323
|
||||
[proc]
|
||||
#plot=True
|
||||
|
||||
[data]
|
||||
root=data
|
||||
hires=bathyhires.dat
|
||||
bathy=buoyarthabathy.dat
|
||||
hstru=Hstru.dat
|
||||
poro=Poro.dat
|
||||
psize=Psize.dat
|
||||
out=out_data
|
||||
out_nb=out_data_nb
|
||||
|
||||
[swash]
|
||||
nb=True
|
||||
input=sws/INPUT.sws
|
||||
path=/opt/swash
|
||||
out=out_sws
|
||||
mpi=4
|
||||
|
||||
[post]
|
||||
inp=inp_post
|
||||
compare=inp_post_nb
|
||||
out=out_post
|
||||
#nperseg=1024
|
||||
dt=0.25
|
||||
x0=-1250
|
||||
t0=180
|
||||
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|
||||
File diff suppressed because one or more lines are too long
|
|
@ -1,3 +1,60 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:4ab57e0a813e6ea3086045717e251b2c44e00891a858d9f6365e3e604fefee03
|
||||
size 1316
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
|
||||
import matplotlib.animation as animation
|
||||
import matplotlib.pyplot as plt
|
||||
import numpy as np
|
||||
import pandas as pd
|
||||
|
||||
parser = argparse.ArgumentParser(description="Animate swash output")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("post")
|
||||
|
||||
log.info("Starting post-processing")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
inp = pathlib.Path(config.get("post", "inp"))
|
||||
root = pathlib.Path(config.get("swash", "out"))
|
||||
|
||||
bathy = pd.read_hdf(
|
||||
pathlib.Path(config.get("data", "out")).joinpath("bathy.h5"), "bathy"
|
||||
)
|
||||
|
||||
|
||||
def data(var):
|
||||
return np.load(inp.joinpath(f"{var}.npy"))
|
||||
|
||||
|
||||
x = data("xp")
|
||||
t = data("tsec")
|
||||
|
||||
watl = data("watl")
|
||||
botl = data("botl")
|
||||
|
||||
wl = np.maximum(watl, -botl)
|
||||
# print(x.size, -np.arange(0, 1 * bathy.hstru.size, 1)[::-1].size)
|
||||
|
||||
fig, ax = plt.subplots()
|
||||
ax.plot(x, -botl, c="k")
|
||||
# ax.fill_between(
|
||||
# x, -botl, -data["botl"] + bathy.hstru, color="k", alpha=0.2
|
||||
# )
|
||||
(line,) = ax.plot(x, wl[0])
|
||||
|
||||
|
||||
def animate(i):
|
||||
line.set_ydata(wl[i])
|
||||
return (line,)
|
||||
|
||||
|
||||
ani = animation.FuncAnimation(
|
||||
fig, animate, frames=wl[:, 0].size, interval=20, blit=True
|
||||
)
|
||||
|
||||
plt.show(block=True)
|
||||
|
|
|
|||
|
|
@ -1,3 +1,93 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:93e058c82e05d4d81cb1bb68459b978780f6c32fd0ba6c5d3662212542a0d118
|
||||
size 2877
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
import sys
|
||||
|
||||
import numpy as np
|
||||
import pandas as pd
|
||||
|
||||
try:
|
||||
import matplotlib.pyplot as plt
|
||||
except ImportError:
|
||||
plt = None
|
||||
|
||||
|
||||
parser = argparse.ArgumentParser(description="Pre-process bathymetry")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("bathy")
|
||||
|
||||
log.info("Starting bathymetry pre-processing")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
root = pathlib.Path(config.get("data", "root"))
|
||||
|
||||
log.info(f"Reading input data from '{root}'")
|
||||
bathy_hires = np.loadtxt(root.joinpath(config.get("data", "hires")))
|
||||
bathy_lores = np.loadtxt(root.joinpath(config.get("data", "bathy")))
|
||||
hstru = np.loadtxt(root.joinpath(config.get("data", "hstru")))
|
||||
poro = np.loadtxt(root.joinpath(config.get("data", "poro")))
|
||||
psize = np.loadtxt(root.joinpath(config.get("data", "psize")))
|
||||
|
||||
log.info("Generating grid")
|
||||
x_hires = -np.arange(0, 0.5 * bathy_hires.size, 0.5)[::-1]
|
||||
x_lores = -np.arange(0, 1 * bathy_lores.size, 1)[::-1]
|
||||
x_hstru = -np.arange(0, 0.5 * hstru.size, 0.5)[::-1]
|
||||
|
||||
log.info("Generating output data")
|
||||
bathy_hires_pd = pd.Series(bathy_hires.copy(), index=x_hires)
|
||||
bathy_lores_pd = pd.Series(bathy_lores.copy(), index=x_lores)
|
||||
|
||||
bathy = pd.DataFrame(
|
||||
index=bathy_lores_pd.index.union(bathy_hires_pd.index),
|
||||
columns=("z", "hstru", "poro", "psize"),
|
||||
data=0,
|
||||
)
|
||||
bathy.z[bathy_lores_pd.index] = bathy_lores_pd
|
||||
bathy.z[bathy_hires_pd.index] = bathy_hires_pd
|
||||
|
||||
bathy.loc[x_hstru, ("hstru", "poro", "psize")] = np.array(
|
||||
(hstru, poro, psize)
|
||||
).T
|
||||
|
||||
bathy = bathy.reindex(bathy_lores_pd.index)
|
||||
log.debug(f"Bathymetry:\n{bathy}")
|
||||
log.info(
|
||||
f"xmin: {bathy.index.min()}, "
|
||||
f"xmax: {bathy.index.max()}, "
|
||||
f"n: {bathy.index.size}"
|
||||
)
|
||||
|
||||
if config.has_option("data", "out"):
|
||||
out = pathlib.Path(config.get("data", "out"))
|
||||
log.info(f"Writing output data to '{out}'")
|
||||
out.mkdir(exist_ok=True)
|
||||
np.savetxt(out.joinpath("bathy.dat"), bathy.z, newline=" ")
|
||||
np.savetxt(out.joinpath("hstru.dat"), bathy.hstru, newline=" ")
|
||||
np.savetxt(out.joinpath("poro.dat"), bathy.poro, newline=" ")
|
||||
np.savetxt(out.joinpath("psize.dat"), bathy.psize, newline=" ")
|
||||
|
||||
bathy.to_hdf(out.joinpath("bathy.h5"), "bathy", mode="w")
|
||||
|
||||
if config.getboolean("proc", "plot", fallback=False):
|
||||
if plt is None:
|
||||
log.error("Could not import PyPlot")
|
||||
sys.exit(1)
|
||||
|
||||
log.info("Plotting data")
|
||||
|
||||
fig, ax = plt.subplots()
|
||||
ax.plot(x_hires, bathy_hires, label="High-res")
|
||||
ax.plot(x_lores, bathy_lores, label="Low-res")
|
||||
ax.plot(bathy.index, bathy.z, ls="-.", c="k", label="Combined")
|
||||
ax.plot(bathy.index, bathy.z + bathy.hstru, label="Hstru")
|
||||
|
||||
ax.grid()
|
||||
ax.legend()
|
||||
plt.show(block=True)
|
||||
|
||||
log.info("Processing finished")
|
||||
|
|
|
|||
|
|
@ -1,3 +1,94 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:8e3a75a559d7bf52e3e1703c5e45c8e473cd813aa99a95169bd9a500285f5a2d
|
||||
size 2923
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
import sys
|
||||
|
||||
import numpy as np
|
||||
import pandas as pd
|
||||
|
||||
try:
|
||||
import matplotlib.pyplot as plt
|
||||
except ImportError:
|
||||
plt = None
|
||||
|
||||
|
||||
parser = argparse.ArgumentParser(description="Pre-process bathymetry")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("bathy")
|
||||
|
||||
log.info("Starting bathymetry pre-processing")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
root = pathlib.Path(config.get("data", "root"))
|
||||
|
||||
log.info(f"Reading input data from '{root}'")
|
||||
bathy_hires = np.loadtxt(root.joinpath(config.get("data", "hires")))
|
||||
bathy_lores = np.loadtxt(root.joinpath(config.get("data", "bathy")))
|
||||
hstru = np.loadtxt(root.joinpath(config.get("data", "hstru")))
|
||||
poro = np.loadtxt(root.joinpath(config.get("data", "poro")))
|
||||
psize = np.loadtxt(root.joinpath(config.get("data", "psize")))
|
||||
|
||||
log.info("Generating grid")
|
||||
x_hires = -np.arange(0, 0.5 * bathy_hires.size, 0.5)[::-1]
|
||||
x_lores = -np.arange(0, 1 * bathy_lores.size, 1)[::-1]
|
||||
x_hstru = -np.arange(0, 0.5 * hstru.size, 0.5)[::-1]
|
||||
|
||||
log.info("Generating output data")
|
||||
bathy_hires_pd = pd.Series(bathy_hires.copy(), index=x_hires)
|
||||
bathy_lores_pd = pd.Series(bathy_lores.copy(), index=x_lores)
|
||||
|
||||
bathy = pd.DataFrame(
|
||||
index=bathy_lores_pd.index.union(bathy_hires_pd.index),
|
||||
columns=("z", "hstru", "poro", "psize"),
|
||||
data=0,
|
||||
)
|
||||
bathy.z[bathy_lores_pd.index] = bathy_lores_pd
|
||||
bathy.z[bathy_hires_pd.index] = bathy_hires_pd
|
||||
bathy.z = np.minimum(bathy.z, -15)
|
||||
|
||||
# bathy.loc[x_hstru, ("hstru", "poro", "psize")] = np.array(
|
||||
# (hstru, poro, psize)
|
||||
# ).T
|
||||
|
||||
bathy = bathy.reindex(bathy_lores_pd.index)
|
||||
log.debug(f"Bathymetry:\n{bathy}")
|
||||
log.info(
|
||||
f"xmin: {bathy.index.min()}, "
|
||||
f"xmax: {bathy.index.max()}, "
|
||||
f"n: {bathy.index.size}"
|
||||
)
|
||||
|
||||
if config.has_option("data", "out_nb"):
|
||||
out = pathlib.Path(config.get("data", "out_nb"))
|
||||
log.info(f"Writing output data to '{out}'")
|
||||
out.mkdir(exist_ok=True)
|
||||
np.savetxt(out.joinpath("bathy.dat"), bathy.z, newline=" ")
|
||||
np.savetxt(out.joinpath("hstru.dat"), bathy.hstru, newline=" ")
|
||||
np.savetxt(out.joinpath("poro.dat"), bathy.poro, newline=" ")
|
||||
np.savetxt(out.joinpath("psize.dat"), bathy.psize, newline=" ")
|
||||
|
||||
bathy.to_hdf(out.joinpath("bathy.h5"), "bathy", mode="w")
|
||||
|
||||
if config.getboolean("proc", "plot", fallback=False):
|
||||
if plt is None:
|
||||
log.error("Could not import PyPlot")
|
||||
sys.exit(1)
|
||||
|
||||
log.info("Plotting data")
|
||||
|
||||
fig, ax = plt.subplots()
|
||||
ax.plot(x_hires, bathy_hires, label="High-res")
|
||||
ax.plot(x_lores, bathy_lores, label="Low-res")
|
||||
ax.plot(bathy.index, bathy.z, ls="-.", c="k", label="Combined")
|
||||
ax.plot(bathy.index, bathy.z + bathy.hstru, label="Hstru")
|
||||
|
||||
ax.grid()
|
||||
ax.legend()
|
||||
plt.show(block=True)
|
||||
|
||||
log.info("Processing finished")
|
||||
|
|
|
|||
|
|
@ -1,3 +1,92 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:60aeefb03fe5f6ec669d64cd781e7254d7aeace3a2faab75098a4734343385a0
|
||||
size 1992
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
|
||||
import matplotlib.animation as animation
|
||||
import matplotlib.pyplot as plt
|
||||
import numpy as np
|
||||
import pandas as pd
|
||||
|
||||
parser = argparse.ArgumentParser(description="Animate swash output")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("post")
|
||||
|
||||
log.info("Starting post-processing")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
inp = pathlib.Path(config.get("post", "inp"))
|
||||
root = pathlib.Path(config.get("swash", "out"))
|
||||
|
||||
bathy = pd.read_hdf(
|
||||
pathlib.Path(config.get("data", "out")).joinpath("bathy.h5"), "bathy"
|
||||
)
|
||||
|
||||
|
||||
def data(var):
|
||||
return np.load(inp.joinpath(f"{var}.npy"))
|
||||
|
||||
|
||||
x = data("xp")
|
||||
t = data("tsec")
|
||||
|
||||
watl = data("watl")
|
||||
botl = data("botl")
|
||||
zk = data("zk")
|
||||
velk = data("velk")
|
||||
vz = data("vz")
|
||||
|
||||
wl = np.maximum(watl, -botl)
|
||||
# print(x.size, -np.arange(0, 1 * bathy.hstru.size, 1)[::-1].size)
|
||||
|
||||
fig, ax = plt.subplots()
|
||||
# ax.plot(x, -botl, c="k")
|
||||
# ax.fill_between(
|
||||
# x, -botl, -data["botl"] + bathy.hstru, color="k", alpha=0.2
|
||||
# )
|
||||
|
||||
n = 0
|
||||
vk = np.sqrt((velk[n] ** 2).sum(axis=1))
|
||||
# print(vk.shape)
|
||||
# plt.imshow(vk)
|
||||
# plt.colorbar()
|
||||
|
||||
lines = ax.plot(x, zk[n].T, c="#0066cc")
|
||||
quiv = []
|
||||
for i in range(10):
|
||||
quiv.append(
|
||||
ax.quiver(
|
||||
x[::50],
|
||||
(zk[n, i, ::50] + zk[n, i + 1, ::50]) / 2,
|
||||
velk[n, i, 0, ::50],
|
||||
vz[n, i, ::50],
|
||||
units="dots",
|
||||
width=2,
|
||||
scale=0.05,
|
||||
)
|
||||
)
|
||||
|
||||
ax.autoscale(True, "w", True)
|
||||
ax.set_ylim(top=15)
|
||||
|
||||
|
||||
def animate(k):
|
||||
for i, q in enumerate(quiv):
|
||||
q.set_UVC(
|
||||
velk[k, i, 0, ::50],
|
||||
vz[k, i, ::50],
|
||||
)
|
||||
for i, l in enumerate(lines):
|
||||
l.set_ydata(zk[k, i])
|
||||
return *quiv, *lines
|
||||
|
||||
|
||||
ani = animation.FuncAnimation(
|
||||
fig, animate, frames=wl[:, 0].size, interval=20, blit=True
|
||||
)
|
||||
|
||||
plt.show(block=True)
|
||||
|
|
|
|||
|
|
@ -1,3 +1,169 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:c8fefac1023d769a2a43c86f159cf33155f5462aed2dcd4ac968d782f79760d4
|
||||
size 4665
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
|
||||
import matplotlib.pyplot as plt
|
||||
import numpy as np
|
||||
import scipy.fft as fft
|
||||
import scipy.signal as sgl
|
||||
|
||||
from .read_swash import *
|
||||
|
||||
parser = argparse.ArgumentParser(description="Post-process swash output")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("post")
|
||||
|
||||
log.info("Starting post-processing")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
inp = pathlib.Path(config.get("post", "inp"))
|
||||
root = pathlib.Path(config.get("swash", "out"))
|
||||
|
||||
log.info(f"Reading data from '{inp}'")
|
||||
x = np.load(inp.joinpath("xp.npy"))
|
||||
t = np.load(inp.joinpath("tsec.npy"))
|
||||
|
||||
botl = np.load(inp.joinpath("botl.npy"))
|
||||
watl = np.load(inp.joinpath("watl.npy"))
|
||||
vel = np.load(inp.joinpath("vel.npy"))
|
||||
|
||||
# Cospectral calculations
|
||||
x0 = config.getint("post", "x0")
|
||||
arg_x0 = np.abs(x - x0).argmin()
|
||||
t0 = config.getfloat("post", "t0")
|
||||
arg_t0 = np.abs(t - t0).argmin()
|
||||
dt = config.getfloat("post", "dt")
|
||||
f = 1 / dt
|
||||
nperseg = config.getint("post", "nperseg", fallback=None)
|
||||
log.info(f"Computing reflection coefficient at x={x0}")
|
||||
|
||||
eta = watl[t > t0, arg_x0]
|
||||
u = vel[t > t0, 0, arg_x0]
|
||||
|
||||
phi_eta = sgl.welch(eta, f, nperseg=nperseg)
|
||||
phi_u = sgl.welch(u, f, nperseg=nperseg)
|
||||
phi_eta_u = sgl.csd(eta, u, f, nperseg=nperseg)
|
||||
|
||||
H = np.sqrt(np.abs(phi_eta[1]))
|
||||
U = np.sqrt(np.abs(phi_u[1]))
|
||||
G = H / U
|
||||
th_eta_u = np.angle(phi_eta_u[1])
|
||||
|
||||
# R1 = np.sqrt(
|
||||
# (np.abs(phi_eta[1]) + np.abs(phi_u[1]) - 2 * np.abs(phi_eta_u[1]))
|
||||
# / (np.abs(phi_eta[1]) + np.abs(phi_u[1]) + 2 * np.abs(phi_eta_u[1]))
|
||||
# )
|
||||
R = np.sqrt(
|
||||
(1 + G**2 - 2 * G * np.cos(th_eta_u))
|
||||
/ (1 + G**2 + 2 * G * np.cos(th_eta_u))
|
||||
)
|
||||
|
||||
if config.has_option("post", "compare"):
|
||||
inp_comp = pathlib.Path(config.get("post", "compare"))
|
||||
x_ = np.load(inp_comp.joinpath("xp.npy"))
|
||||
t_ = np.load(inp_comp.joinpath("tsec.npy"))
|
||||
|
||||
botl_ = np.load(inp_comp.joinpath("botl.npy"))
|
||||
watl_ = np.load(inp_comp.joinpath("watl.npy"))
|
||||
vel_ = np.load(inp_comp.joinpath("vel.npy"))
|
||||
|
||||
arg_x0_ = np.abs(x_ - x0).argmin()
|
||||
arg_t0_ = np.abs(t_ - t0).argmin()
|
||||
|
||||
eta_ = watl_[t_ > t0, arg_x0_]
|
||||
u_ = vel_[t_ > t0, 0, arg_x0_]
|
||||
|
||||
phi_eta_ = sgl.welch(eta_, f, nperseg=nperseg)
|
||||
phi_u_ = sgl.welch(u_, f, nperseg=nperseg)
|
||||
phi_eta_u_ = sgl.csd(eta_, u_, f, nperseg=nperseg)
|
||||
|
||||
H_ = np.sqrt(np.abs(phi_eta_[1]))
|
||||
U_ = np.sqrt(np.abs(phi_u_[1]))
|
||||
G_ = H_ / U_
|
||||
th_eta_u_ = np.angle(phi_eta_u_[1])
|
||||
|
||||
R_ = np.sqrt(
|
||||
(1 + G_**2 - 2 * G_ * np.cos(th_eta_u_))
|
||||
/ (1 + G_**2 + 2 * G_ * np.cos(th_eta_u_))
|
||||
)
|
||||
|
||||
|
||||
# Plotting
|
||||
log.info("Plotting results")
|
||||
fig, (ax_watl, ax_vel) = plt.subplots(2)
|
||||
|
||||
ax_watl.plot(t, watl[:, arg_x0], lw=1, label="watl")
|
||||
ax_watl.set(xlabel="t (s)", ylabel="z (m)")
|
||||
ax_watl.autoscale(axis="x", tight=True)
|
||||
ax_watl.grid()
|
||||
ax_watl.axvline(t0, c="k", alpha=0.2)
|
||||
|
||||
ax_vel.plot(t, vel[:, 0, arg_x0], lw=1, label="vel")
|
||||
ax_vel.set(xlabel="t (s)", ylabel="U (m/s)")
|
||||
ax_vel.autoscale(axis="x", tight=True)
|
||||
ax_vel.grid()
|
||||
ax_vel.axvline(t0, c="k", alpha=0.2)
|
||||
|
||||
fig.tight_layout()
|
||||
|
||||
fig_r, ax_r = plt.subplots()
|
||||
ax_fft = ax_r.twinx()
|
||||
|
||||
ax_fft.plot(
|
||||
*sgl.welch(eta, 1 / dt, nperseg=nperseg),
|
||||
lw=1,
|
||||
c="k",
|
||||
alpha=0.2,
|
||||
label="PSD ($\\eta$, cas 1)",
|
||||
)
|
||||
ax_r.plot(phi_eta[0], R, marker="+", label="R (cas 1)")
|
||||
if config.has_option("post", "compare"):
|
||||
ax_fft.plot(
|
||||
*sgl.welch(eta_, 1 / dt, nperseg=nperseg),
|
||||
lw=1,
|
||||
c="k",
|
||||
alpha=0.2,
|
||||
label="PSD ($\\eta$, cas 2)",
|
||||
)
|
||||
ax_r.plot(phi_eta[0], R_, marker="+", label="R (cas 2)")
|
||||
ax_r.set(xlim=(0, 0.3), ylim=(0, 1), xlabel="f (Hz)", ylabel="R")
|
||||
ax_fft.set(ylim=0, ylabel="PSD (m²/Hz)")
|
||||
ax_r.grid()
|
||||
ax_r.legend(loc="upper left")
|
||||
ax_fft.legend(loc="upper right")
|
||||
fig_r.tight_layout()
|
||||
|
||||
fig_x, ax_x = plt.subplots(figsize=(10, 1))
|
||||
ax_x.plot(x, -botl, color="k")
|
||||
ax_x.plot(
|
||||
x,
|
||||
np.maximum(watl[arg_t0, :], -botl),
|
||||
)
|
||||
if config.has_option("post", "compare"):
|
||||
ax_x.plot(x, -botl_, color="k", ls="-.")
|
||||
ax_x.plot(
|
||||
x,
|
||||
np.maximum(watl_[arg_t0, :], -botl_),
|
||||
ls="-.",
|
||||
)
|
||||
ax_x.axvline(x0, c="k", alpha=0.2)
|
||||
ax_x.set(xlabel="x (m)", ylabel="z (m)")
|
||||
ax_x.autoscale(axis="x", tight=True)
|
||||
ax_x.set(aspect="equal")
|
||||
fig_x.tight_layout()
|
||||
|
||||
out = pathlib.Path(config.get("post", "out")).joinpath(f"t{t0}x{x0}")
|
||||
log.info(f"Saving plots in '{out}'")
|
||||
out.mkdir(parents=True, exist_ok=True)
|
||||
|
||||
fig.savefig(out.joinpath("t.png"))
|
||||
fig_r.savefig(out.joinpath("R.png"))
|
||||
fig_x.savefig(out.joinpath("x.png"))
|
||||
plt.show(block=True)
|
||||
|
||||
log.info("Finished post-processing")
|
||||
|
|
|
|||
|
|
@ -1,3 +1,52 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:81ddc1baff1a727e68dc2819fe3f39ca657c488ab8cbeb83c2d260ae7c9c13fd
|
||||
size 1349
|
||||
import subprocess
|
||||
import tempfile
|
||||
|
||||
import numpy as np
|
||||
|
||||
|
||||
class ReadSwash:
|
||||
def __init__(self):
|
||||
self._n_x = None
|
||||
self._n_t = None
|
||||
self._t = None
|
||||
self._x = None
|
||||
|
||||
@classmethod
|
||||
def read_nohead(cls, path):
|
||||
subprocess.run(("sed", "-i", r"s/ /\n/g", path))
|
||||
return np.loadtxt(path)
|
||||
|
||||
def read_time(self, path):
|
||||
self._t = np.unique(self.read_nohead(path))
|
||||
self._n_t = self._t.size
|
||||
return self.t
|
||||
|
||||
def read_x(self, path):
|
||||
self._x = np.unique(self.read_nohead(path))
|
||||
self._n_x = self._x.size
|
||||
return self.x
|
||||
|
||||
def read_scalar(self, path, const=False):
|
||||
if const:
|
||||
return self.read_nohead(path).reshape((self._n_t, self._n_x))[0, :]
|
||||
return self.read_nohead(path).reshape((self._n_t, self._n_x))
|
||||
|
||||
def read_const(self, path):
|
||||
return self.read_scalar(path, const=True)
|
||||
|
||||
def read_vector(self, path):
|
||||
return self.read_nohead(path).reshape((self._n_t, 2, self._n_x))
|
||||
|
||||
def read_scalar_lay(self, path):
|
||||
return self.read_nohead(path).reshape((self._n_t, -1, self._n_x))
|
||||
|
||||
def read_vector_lay(self, path):
|
||||
return self.read_nohead(path).reshape((self._n_t, -1, 2, self._n_x))
|
||||
|
||||
@property
|
||||
def t(self):
|
||||
return self._t
|
||||
|
||||
@property
|
||||
def x(self):
|
||||
return self._x
|
||||
|
|
|
|||
|
|
@ -1,3 +1,67 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:b17bd29f45896e07ef9e48ab27c905158de21bdedc7b9ecbf1a7943e4af7ae70
|
||||
size 1962
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import os
|
||||
import pathlib
|
||||
import shutil
|
||||
import subprocess
|
||||
import sys
|
||||
import tempfile
|
||||
|
||||
parser = argparse.ArgumentParser(description="Run swash model")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("swash")
|
||||
|
||||
log.info("Starting swash model")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
inp = pathlib.Path(config.get("swash", "input"))
|
||||
out = pathlib.Path(config.get("swash", "out"))
|
||||
if out.exists():
|
||||
log.error(f"Swash output '{out}' already exists")
|
||||
sys.exit(1)
|
||||
|
||||
with tempfile.TemporaryDirectory(prefix="swash_", dir=".") as tmp_raw:
|
||||
tmpdir = pathlib.Path(tmp_raw)
|
||||
|
||||
log.info(f"Copying files to '{tmpdir}'")
|
||||
shutil.copy2(inp, tmpdir)
|
||||
if config.getboolean("swash", "nb", fallback=False):
|
||||
path = pathlib.Path(config.get("data", "out_nb"))
|
||||
else:
|
||||
path = pathlib.Path(config.get("data", "out"))
|
||||
shutil.copytree(path, tmpdir, dirs_exist_ok=True)
|
||||
|
||||
if config.has_option("swash", "mpi"):
|
||||
mpi = ("-mpi", config.get("swash", "mpi"))
|
||||
log.info(f"Using mpi with {mpi}")
|
||||
else:
|
||||
mpi = ()
|
||||
|
||||
with open(tmpdir.joinpath("sws.log"), "w") as logfile:
|
||||
log.info(f"Runing swash in '{tmpdir}'")
|
||||
path = pathlib.Path(config.get("swash", "path"))
|
||||
|
||||
cmd = (path.joinpath("swashrun"), "-input", inp.name, *mpi)
|
||||
log.info(f"Running {cmd}")
|
||||
|
||||
swash_run = subprocess.Popen(
|
||||
cmd,
|
||||
cwd=tmpdir,
|
||||
stdout=logfile,
|
||||
stderr=logfile,
|
||||
env={"PATH": f"{path}:{os.environ['PATH']}"},
|
||||
)
|
||||
|
||||
code = swash_run.wait()
|
||||
if code != 0:
|
||||
log.error(f"Swash returned error code {code}")
|
||||
|
||||
log.info(f"Moving swash output to '{out}'")
|
||||
shutil.move(tmpdir, out)
|
||||
|
||||
log.info(f"Swash model finished successfully")
|
||||
|
|
|
|||
|
|
@ -1,3 +1,51 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:f3b186f594089b65b3739d2f03855c691f45e0b2744e37196e07cdf60c896cfc
|
||||
size 1393
|
||||
import argparse
|
||||
import configparser
|
||||
import logging
|
||||
import pathlib
|
||||
from multiprocessing.pool import ThreadPool
|
||||
|
||||
import numpy as np
|
||||
import pandas as pd
|
||||
|
||||
from .read_swash import ReadSwash
|
||||
|
||||
parser = argparse.ArgumentParser(description="Convert swash output to numpy")
|
||||
parser.add_argument("-v", "--verbose", action="count", default=0)
|
||||
args = parser.parse_args()
|
||||
|
||||
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
|
||||
log = logging.getLogger("sws_npz")
|
||||
|
||||
log.info("Starting sws -> npz converter")
|
||||
config = configparser.ConfigParser()
|
||||
config.read("config.ini")
|
||||
|
||||
sws_out = pathlib.Path(config.get("swash", "out"))
|
||||
inp = pathlib.Path(config.get("post", "inp"))
|
||||
|
||||
log.info(f"Reading swash output from '{sws_out}'")
|
||||
rsws = ReadSwash()
|
||||
np.save(inp.joinpath("tsec"), rsws.read_time(sws_out.joinpath("tsec.dat")))
|
||||
np.save(inp.joinpath("xp"), rsws.read_x(sws_out.joinpath("xp.dat")))
|
||||
|
||||
var = {
|
||||
"dep": rsws.read_scalar,
|
||||
"botl": rsws.read_const,
|
||||
"watl": rsws.read_scalar,
|
||||
"vel": rsws.read_vector,
|
||||
"press": rsws.read_scalar,
|
||||
"zk": rsws.read_scalar_lay,
|
||||
"velk": rsws.read_vector_lay,
|
||||
"vz": rsws.read_scalar_lay,
|
||||
}
|
||||
|
||||
inp.mkdir(exist_ok=True)
|
||||
with ThreadPool() as pool:
|
||||
log.info("Converting all data")
|
||||
pool.map(
|
||||
lambda x: np.save(
|
||||
inp.joinpath(x[0]),
|
||||
x[1](sws_out.joinpath(x[0]).with_suffix(".dat")),
|
||||
),
|
||||
var.items(),
|
||||
)
|
||||
|
|
|
|||
|
|
@ -1,3 +1,58 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:3f85c1b0ecdfa156bd0d04a7654abd412080df57aa4a24190bbaac57b0335a12
|
||||
size 2300
|
||||
$************************* GENERAL ***************************************
|
||||
PROJ 'GW' 'T1'
|
||||
SET NAUT
|
||||
SET LEVEL 0.94
|
||||
SET MAXERR 1
|
||||
SET DEPMIN 0.001
|
||||
MODE DYN ONED
|
||||
$************************ GRIDS ***************************************
|
||||
CGRID REG -1251 0 0 1251 0 1250 0
|
||||
INPGRID BOT REG -1251 0 0 1250 0 1 0 $x0 y0 theta nx-1 ny-1 dx dy
|
||||
VERT 10 $nb couches
|
||||
READ BOTTOM -1 'bathy.dat' 3 0 FREE
|
||||
|
||||
INPGRID PORO REG -1251 0 0 1250 0 1 0
|
||||
INPGRID PSIZ REG -1251 0 0 1250 0 1 0
|
||||
INPGRID HSTRUC REG -1251 0 0 1250 0 1 0
|
||||
|
||||
READINP PORO 1 'poro.dat' 3 0 FREE
|
||||
READINP PSIZ 1 'psize.dat' 3 0 FREE
|
||||
READINP HSTRUC 1 'hstru.dat' 3 0 FREE
|
||||
|
||||
|
||||
$*********************** BOUNDARIES ****************************************
|
||||
INIT ZERO
|
||||
BOUN SHAP JON SIG PEAK DSPR DEGR
|
||||
BOUN SIDE W BTYPE WEAK SMOOT 10 SEC ADDBOUNDWAVE CON SPECT 1.55 13.3 0 0 CYCLE 20 MIN
|
||||
BOUN SIDE E BTYPE SOMMERFELD
|
||||
|
||||
|
||||
$*********************** PHYSICS *******************************************
|
||||
BRE 0.6 0.2
|
||||
FRICTION MANN 0.08
|
||||
POROsity 4 200 1.1 13
|
||||
VISC V KEPS
|
||||
|
||||
$*********************** NUMERICS ******************************************
|
||||
NONHYD BOX 1.0 PREC ILU
|
||||
DISCRET UPW MOM
|
||||
TIMEI 0.2 0.6
|
||||
|
||||
$*********************** OUTPUTS *******************************************
|
||||
SET OUTLEV 1
|
||||
$BLOCK 'COMPGRID' HEAD 'test.txt' LAY 4 TSEC XP DEP BOTL WATL PRESS DISCH USTAR VEL VZ VELK ZK BRKP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'tsec.dat' TSEC OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'xp.dat' XP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'dep.dat' DEP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'botl.dat' BOTL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'watl.dat' WATL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'press.dat' PRESS OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'disch.dat' DISCH OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'ustar.dat' USTAR OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'vel.dat' VEL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'vz.dat' VZ OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'velk.dat' VELK OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'zk.dat' ZK OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'brkp.dat' BRKP OUTPUT 000000.00 0.25 SEC
|
||||
COMPUTE 000000.000 0.015 SEC 003000.000 $timeini dtini unit timefin
|
||||
STOP
|
||||
|
|
|
|||
|
|
@ -1,3 +1,58 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:ce3044df5425b1858aada8e6a1aab3f081f0b48151902c66a3c02f0463f13d98
|
||||
size 2299
|
||||
$************************* GENERAL ***************************************
|
||||
PROJ 'GW' 'T1'
|
||||
SET NAUT
|
||||
SET LEVEL 4.5
|
||||
SET MAXERR 1
|
||||
SET DEPMIN 0.001
|
||||
MODE DYN ONED
|
||||
$************************ GRIDS ***************************************
|
||||
CGRID REG -1250 0 0 1250 0 1250 0
|
||||
INPGRID BOT REG -1250 0 0 1250 0 1 0 $x0 y0 theta nx-1 ny-1 dx dy
|
||||
VERT 10 $nb couches
|
||||
READ BOTTOM -1 'bathy.dat' 3 0 FREE
|
||||
|
||||
INPGRID PORO REG -1251 0 0 1250 0 1 0
|
||||
INPGRID PSIZ REG -1251 0 0 1250 0 1 0
|
||||
INPGRID HSTRUC REG -1251 0 0 1250 0 1 0
|
||||
|
||||
READINP PORO 1 'poro.dat' 3 0 FREE
|
||||
READINP PSIZ 1 'psize.dat' 3 0 FREE
|
||||
READINP HSTRUC 1 'hstru.dat' 3 0 FREE
|
||||
|
||||
|
||||
$*********************** BOUNDARIES ****************************************
|
||||
INIT ZERO
|
||||
BOUN SHAP JON SIG PEAK DSPR DEGR
|
||||
BOUN SIDE W BTYPE WEAK SMOOT 10 SEC ADDBOUNDWAVE CON SPECT 7.31 16.9 0 0 CYCLE 20 MIN
|
||||
BOUN SIDE E BTYPE SOMMERFELD
|
||||
|
||||
|
||||
$*********************** PHYSICS *******************************************
|
||||
BRE 0.6 0.2
|
||||
FRICTION MANN 0.08
|
||||
POROsity 4 200 1.1 13
|
||||
VISC V KEPS
|
||||
|
||||
$*********************** NUMERICS ******************************************
|
||||
NONHYD BOX 1.0 PREC ILU
|
||||
DISCRET UPW MOM
|
||||
TIMEI 0.2 0.6
|
||||
|
||||
$*********************** OUTPUTS *******************************************
|
||||
SET OUTLEV 1
|
||||
$BLOCK 'COMPGRID' HEAD 'test.txt' LAY 4 TSEC XP DEP BOTL WATL PRESS DISCH USTAR VEL VZ VELK ZK BRKP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'tsec.dat' TSEC OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'xp.dat' XP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'dep.dat' DEP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'botl.dat' BOTL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'watl.dat' WATL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'press.dat' PRESS OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'disch.dat' DISCH OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'ustar.dat' USTAR OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'vel.dat' VEL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'vz.dat' VZ OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'velk.dat' VELK OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'zk.dat' ZK OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'brkp.dat' BRKP OUTPUT 000000.00 0.25 SEC
|
||||
COMPUTE 000000.000 0.015 SEC 002500.000 $timeini dtini unit timefin
|
||||
STOP
|
||||
|
|
|
|||
|
|
@ -1,3 +1,59 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:e307c866ed9c49575428171b676dfb21a1af867f99dab1c99aa095ab9520d5e2
|
||||
size 2310
|
||||
$************************* GENERAL ***************************************
|
||||
PROJ 'GW' 'T1'
|
||||
SET NAUT
|
||||
SET LEVEL 4.5
|
||||
SET MAXERR 1
|
||||
SET DEPMIN 0.001
|
||||
MODE DYN ONED
|
||||
$************************ GRIDS ***************************************
|
||||
CGRID REG -1250 0 0 1250 0 1250 0
|
||||
INPGRID BOT REG -1250 0 0 1250 0 1 0 $x0 y0 theta nx-1 ny-1 dx dy
|
||||
VERT 10 $nb couches
|
||||
READ BOTTOM -1 'bathy.dat' 3 0 FREE
|
||||
|
||||
INPGRID PORO REG -1251 0 0 1250 0 1 0
|
||||
INPGRID PSIZ REG -1251 0 0 1250 0 1 0
|
||||
INPGRID HSTRUC REG -1251 0 0 1250 0 1 0
|
||||
|
||||
READINP PORO 1 'poro.dat' 3 0 FREE
|
||||
READINP PSIZ 1 'psize.dat' 3 0 FREE
|
||||
READINP HSTRUC 1 'hstru.dat' 3 0 FREE
|
||||
|
||||
|
||||
$*********************** BOUNDARIES ****************************************
|
||||
INIT ZERO
|
||||
BOUN SHAP JON SIG PEAK DSPR DEGR
|
||||
BOUN SIDE W BTYPE WEAK SMOOT 10 SEC ADDBOUNDWAVE CON SPECT 7.31 16.9 0 0 CYCLE 20 MIN
|
||||
BOUN SIDE E BTYPE SOMMERFELD
|
||||
SPON E 250
|
||||
|
||||
|
||||
$*********************** PHYSICS *******************************************
|
||||
BRE 0.6 0.2
|
||||
FRICTION MANN 0.08
|
||||
POROsity 4 200 1.1 13
|
||||
VISC V KEPS
|
||||
|
||||
$*********************** NUMERICS ******************************************
|
||||
NONHYD BOX 1.0 PREC ILU
|
||||
DISCRET UPW MOM
|
||||
TIMEI 0.2 0.6
|
||||
|
||||
$*********************** OUTPUTS *******************************************
|
||||
SET OUTLEV 1
|
||||
$BLOCK 'COMPGRID' HEAD 'test.txt' LAY 4 TSEC XP DEP BOTL WATL PRESS DISCH USTAR VEL VZ VELK ZK BRKP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'tsec.dat' TSEC OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'xp.dat' XP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'dep.dat' DEP OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'botl.dat' BOTL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'watl.dat' WATL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'press.dat' PRESS OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'disch.dat' DISCH OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'ustar.dat' USTAR OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'vel.dat' VEL OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'vz.dat' VZ OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'velk.dat' VELK OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'zk.dat' ZK OUTPUT 000000.00 0.25 SEC
|
||||
BLOCK 'COMPGRID' NOHEAD 'brkp.dat' BRKP OUTPUT 000000.00 0.25 SEC
|
||||
COMPUTE 000000.000 0.015 SEC 002500.000 $timeini dtini unit timefin
|
||||
STOP
|
||||
|
|
|
|||
8
tasks.md
8
tasks.md
|
|
@ -1,3 +1,5 @@
|
|||
version https://git-lfs.github.com/spec/v1
|
||||
oid sha256:039b226e1905ffff4943cc6ad2b34e53f901b98658ee9fd35cbec3ba151e8ecf
|
||||
size 170
|
||||
# Tasks
|
||||
|
||||
- 1D SWASH with buoy input -> reflection depending on breakwater
|
||||
- Input 1D SWASH output as initial and boundary conditions in olaFlow
|
||||
- 2Dh SWASH -> 3D olaFlow
|
||||
|
|
|
|||
Loading…
Reference in a new issue