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internship/swash/processing/post.py

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import argparse
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import configparser
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import logging
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import pathlib
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import matplotlib.pyplot as plt
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import numpy as np
import scipy.signal as sgl
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import scipy.fft as fft
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from .read_swash import *
parser = argparse.ArgumentParser(description="Post-process swash output")
parser.add_argument("-v", "--verbose", action="count", default=0)
args = parser.parse_args()
logging.basicConfig(level=max((10, 20 - 10 * args.verbose)))
log = logging.getLogger("post")
log.info("Starting post-processing")
config = configparser.ConfigParser()
config.read("config.ini")
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inp = pathlib.Path(config.get("post", "inp"))
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root = pathlib.Path(config.get("swash", "out"))
log.info(f"Reading data from '{inp}'")
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data = np.load(inp.joinpath(config.get("post", "case")))
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x, t = data["x"], data["t"]
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# Cospectral calculations
x0 = config.getint("post", "x0")
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arg_x0 = np.abs(x - x0).argmin()
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t0 = config.getfloat("post", "t0")
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arg_t0 = np.abs(t - t0).argmin()
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dt = config.getfloat("post", "dt")
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f = 1 / dt
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nperseg = config.getint("post", "nperseg", fallback=None)
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log.info(f"Computing reflection coefficient at x={x0}")
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eta = data["watl"][t > t0, arg_x0]
u = data["vel"][t > t0, 0, arg_x0]
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phi_eta = sgl.welch(eta, f, nperseg=nperseg)
phi_u = sgl.welch(u, f, nperseg=nperseg)
phi_eta_u = sgl.csd(eta, u, f, nperseg=nperseg)
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H = np.sqrt(np.abs(phi_eta[1]))
U = np.sqrt(np.abs(phi_u[1]))
G = H / U
th_eta_u = np.angle(phi_eta_u[1])
# R1 = np.sqrt(
# (np.abs(phi_eta[1]) + np.abs(phi_u[1]) - 2 * np.abs(phi_eta_u[1]))
# / (np.abs(phi_eta[1]) + np.abs(phi_u[1]) + 2 * np.abs(phi_eta_u[1]))
# )
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R = np.sqrt(
(1 + G**2 - 2 * G * np.cos(th_eta_u))
/ (1 + G**2 + 2 * G * np.cos(th_eta_u))
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)
if config.has_option("post", "compare"):
data_comp = np.load(inp.joinpath(config.get("post", "compare")))
x_, t_ = data_comp["x"], data_comp["t"]
arg_x0_ = np.abs(x_ - x0).argmin()
arg_t0_ = np.abs(t_ - t0).argmin()
eta_ = data_comp["watl"][t_ > t0, arg_x0_]
u_ = data_comp["vel"][t_ > t0, 0, arg_x0_]
phi_eta_ = sgl.welch(eta_, f, nperseg=nperseg)
phi_u_ = sgl.welch(u_, f, nperseg=nperseg)
phi_eta_u_ = sgl.csd(eta_, u_, f, nperseg=nperseg)
H_ = np.sqrt(np.abs(phi_eta_[1]))
U_ = np.sqrt(np.abs(phi_u_[1]))
G_ = H_ / U_
th_eta_u_ = np.angle(phi_eta_u_[1])
R_ = np.sqrt(
(1 + G_**2 - 2 * G_ * np.cos(th_eta_u_))
/ (1 + G_**2 + 2 * G_ * np.cos(th_eta_u_))
)
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# Plotting
log.info("Plotting results")
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fig, (ax_watl, ax_vel) = plt.subplots(2)
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ax_watl.plot(t, data["watl"][:, arg_x0], lw=1, label="watl")
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ax_watl.set(xlabel="t (s)", ylabel="z (m)")
ax_watl.autoscale(axis="x", tight=True)
ax_watl.grid()
ax_watl.axvline(t0, c="k", alpha=0.2)
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ax_vel.plot(t, data["vel"][:, 0, arg_x0], lw=1, label="vel")
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ax_vel.set(xlabel="t (s)", ylabel="U (m/s)")
ax_vel.autoscale(axis="x", tight=True)
ax_vel.grid()
ax_vel.axvline(t0, c="k", alpha=0.2)
fig.tight_layout()
fig_r, ax_r = plt.subplots()
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ax_fft = ax_r.twinx()
ax_fft.plot(
*sgl.welch(eta, 1 / dt, nperseg=nperseg),
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lw=1,
c="k",
alpha=0.2,
label="PSD ($\\eta$, cas 1)",
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)
ax_r.plot(phi_eta[0], R, marker="+", label="R (cas 1)")
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if config.has_option("post", "compare"):
ax_fft.plot(
*sgl.welch(eta_, 1 / dt, nperseg=nperseg),
lw=1,
c="k",
alpha=0.2,
label="PSD ($\\eta$, cas 2)",
)
ax_r.plot(phi_eta[0], R_, marker="+", label="R (cas 2)")
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ax_r.set(xlim=(0, 0.3), ylim=(0, 1), xlabel="f (Hz)", ylabel="R")
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ax_fft.set(ylim=0, ylabel="PSD (m²/Hz)")
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ax_r.grid()
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ax_r.legend(loc="upper left")
ax_fft.legend(loc="upper right")
fig_r.tight_layout()
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fig_x, ax_x = plt.subplots(figsize=(10, 1))
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ax_x.plot(data["x"], -data["botl"], color="k")
ax_x.plot(
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data["x"],
np.maximum(data["watl"][arg_t0, :], -data["botl"]),
)
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if config.has_option("post", "compare"):
ax_x.plot(data["x"], -data_comp["botl"], color="k", ls="-.")
ax_x.plot(
data["x"],
np.maximum(data_comp["watl"][arg_t0, :], -data_comp["botl"]),
ls="-.",
)
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ax_x.axvline(x0, c="k", alpha=0.2)
ax_x.set(xlabel="x (m)", ylabel="z (m)")
ax_x.autoscale(axis="x", tight=True)
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ax_x.set(aspect="equal")
fig_x.tight_layout()
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out = pathlib.Path(config.get("post", "out")).joinpath(f"t{t0}x{x0}")
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log.info(f"Saving plots in '{out}'")
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out.mkdir(parents=True, exist_ok=True)
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fig.savefig(out.joinpath("t.png"))
fig_r.savefig(out.joinpath("R.png"))
fig_x.savefig(out.joinpath("x.png"))
plt.show(block=True)
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log.info("Finished post-processing")